Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01946 AGGCTGAAACCCCTCTGTAAAACAATGGCTTCCTCCAACACTCCCAAATCCCATAAATCTCCCAAAGCCAAGAAAGGAGAAATCTCCACAGCCCAAAATAAAACGAAGGAGAAAAATCGAGACATCACCAAAGAGGAGAGCCAAAAGAAGAAGAATAAGAAGCCCAAGCTCATCAACGGCAATTCCAAACACCCACACGAAAAGGGCGCAGAAGGAAGCGGCGAAGATGGGAAAGCCAACGTGTTTCCCATGAATCGTATCAGAACCATGATCAAGGGCGAAGATCCTGATATGCGTGTTTCGCAGGAAGCGGTGTTAGCCATCAACAAAGCTGTGGAGAAGTTTCTTGAGCAATTCACGCAGGACGCTTATTCTTGTTGTGTCCAGGACCGCAAGAAATGTCTGAGTTACAAGCACGTTGGGTTGGATTGCATGGTGCCTTCCTCGCGTGTGAGGAGGCCGCCGGCCCATATTAGATGTTACTCCACGGCTAGAGGTTCTCTGCTTCTTGCTGCACCTGTCGAGCACTTTTGCTTTATGAAAGGTGTCTCTCTCTCCAAGCAGTTTTTGCTCCTTAGCAGCTGTCACGACCTTCGAGCATTTTTGCTCTTTGCAAATGTTGTTAGTAAGAAGAGGAGATACGACTTTCTTTCCGATTTTGTTCCTGAGAAAGTGAAAGCTGAGGATGCACTAAGAGAGAGAGATGCAGCAGGCAATGGAGTATTTCAGAAAATCTAA 738 0.4675 RLKPLCKTMASSNTPKSHKSPKAKKGEISTAQNKTKEKNRDITKEESQKKKNKKPKLINGNSKHPHEKGAEGSGEDGKANVFPMNRIRTMIKGEDPDMRVSQEAVLAINKAVEKFLEQFTQDAYSCCVQDRKKCLSYKHVGLDCMVPSSRVRRPPAHIRCYSTARGSLLLAAPVEHFCFMKGVSLSKQFLLLSSCHDLRAFLLFANVVSKKRRYDFLSDFVPEKVKAEDALRERDAAGNGVFQKI 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01946 245 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 45 140 - -
Vimu5g01946 245 MobiDBLite consensus disorder prediction 20 53 - -
Vimu5g01946 245 MobiDBLite consensus disorder prediction 1 81 - -
Vimu5g01946 245 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 82 140 IPR003958 -
Vimu5g01946 245 Gene3D Histone, subunit A 17 223 IPR009072 GO:0046982
Vimu5g01946 245 MobiDBLite consensus disorder prediction 60 74 - -
Vimu5g01946 245 SUPERFAMILY Histone-fold 61 140 IPR009072 GO:0046982
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g01946 71 140 CCAAT-HAP5 Transcription Factor Family AT1G07980 42.857 2.33e-15 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01946 - - gmx:100793738 155.221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g01946 5 31353012 31356854 Vimu5g01946 5 31353012 31356854 ECH