Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01831 ATGGGTCAGATCCAGTATTCTGAGAAGTACTTCGATGACACTTATGAATACAGACATGTGGTTCTGCCTCCTGAAGTGGCCAAAATGCTTCCTAAGAATCGGCTTCTTTCTGAAAATGAGTGTCGAGCAATTGGGGTTTCACGTATTGTGGTTTTCTTGTGCAACTTTTGTGGTGCAAGGGCCATTTCTGTTGCTAAGTTTTTTGGTTTAATGTTATTACAGAATGAGTGGCGAGCAATTGGGGTTCAGCAGAGCCGTGGTTGGGTTCATTACGCCATTCATCGCCCTGAGCCACACATAATGCTTTTCAGGAGGCCTTTGAATTATCAGCAGCAGCAGGAGAACCAGGCCCAGCAAAGCATGCTTGTCAAATGA 375 0.4507 MGQIQYSEKYFDDTYEYRHVVLPPEVAKMLPKNRLLSENECRAIGVSRIVVFLCNFCGARAISVAKFFGLMLLQNEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQSMLVK 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01831 124 Gene3D - 63 121 IPR036858 GO:0016538
Vimu5g01831 124 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 72 120 - -
Vimu5g01831 124 SUPERFAMILY Cell cycle regulatory proteins 70 118 IPR036858 GO:0016538
Vimu5g01831 124 Pfam Cyclin-dependent kinase regulatory subunit 4 47 IPR000789 GO:0016538
Vimu5g01831 124 Pfam Cyclin-dependent kinase regulatory subunit 71 106 IPR000789 GO:0016538
Vimu5g01831 124 PRINTS Cyclin-dependent kinase regulatory subunit signature 3 17 IPR000789 GO:0016538
Vimu5g01831 124 PRINTS Cyclin-dependent kinase regulatory subunit signature 18 32 IPR000789 GO:0016538
Vimu5g01831 124 ProSitePatterns Cyclin-dependent kinases regulatory subunits signature 1. 6 24 IPR000789 GO:0016538
Vimu5g01831 124 Gene3D - 1 50 IPR036858 GO:0016538
Vimu5g01831 124 SUPERFAMILY Cell cycle regulatory proteins 2 47 IPR036858 GO:0016538
Vimu5g01831 124 SMART CKS_2 3 108 IPR000789 GO:0016538
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g01831 1 118 Core Cell Cycle Gene Families AT2G27970 62.712 1.68e-45 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01831 K02219 - gmx:547737 163.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g01831 5 30209829 30210837 Vimu5g01831 5 30209829 30210837 ECH