Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01827 ATGGTTTTGGTTGAGAATGAATCTGAAACATGGTCACAGTCACCAAGTCATAATGAGTCCCATGAAGATCACGAGGATTTAAATAATTCTAGCTGTGAAAACTCTTCTGATTTAGGAGAAGTTGAAAGGGAAAGAGTTAGGCAAATTTTCAGGGAATGGATGAATAGTGGTGCCAGGGATCATGTATCAAGTGGATCTCGACGAAGTAGTGGTTCAAGGAGAGAATGGCTTGGGGAAACTGAACAGGAAAGGAGAAGTGTTTCATCTGGGGAAAACAGGGAAGAACCATCTGCTGAAATTGGTACACAAATTGAACGTGTTCGTGATGGACTCGTTGTTAACCAGAATGGGGGCCAAAATGAGCATACACGGAGGGGCATACGGAAATTATGCGGCCGACAGGCTATGCTTGATATGCTTAAGAAGGCTGAAAGAGAGAGGCAAAGAGAAATTGAGGATTTGTCAGTACATCGGGCTGTATCTCAATTCCCCTATCGGAGGGATTTATCGCTAGAAAGGAGAATTGTGGTTGCAGTCAAGCAACCAGCAATGTATCTGATACCTCGTCAAATGTTGATAATATTGATTTTAGCACCAATGAACAAATGGGATCAAACAGTTCACATTTAG 630 0.4222 MVLVENESETWSQSPSHNESHEDHEDLNNSSCENSSDLGEVERERVRQIFREWMNSGARDHVSSGSRRSSGSRREWLGETEQERRSVSSGENREEPSAEIGTQIERVRDGLVVNQNGGQNEHTRRGIRKLCGRQAMLDMLKKAERERQREIEDLSVHRAVSQFPYRRDLSLERRIVVAVKQPAMYLIPRQMLIILILAPMNKWDQTVHI 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01827 209 Coils Coil 133 153 - -
Vimu5g01827 209 MobiDBLite consensus disorder prediction 1 15 - -
Vimu5g01827 209 MobiDBLite consensus disorder prediction 1 103 - -
Vimu5g01827 209 MobiDBLite consensus disorder prediction 16 30 - -
Vimu5g01827 209 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 7 167 - -
Vimu5g01827 209 MobiDBLite consensus disorder prediction 66 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01827 Vimu-Chr5 30170739 30175672 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01827 - - gmx:100801329 264.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g01827 5 30170739 30175672 Vimu5g01827 5 30170739 30175672 ECH
Vimu4g00699 4 5432711 5439452 Vimu5g01827 5 30170739 30175672 PCT