Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01768 ATGAGTTTTGAAGGTTTTCTTTCTCTTCAATCAATGCCTGCTACATGCGGCTTCTTCTTCTTCGCCTTCACCCTTCTCTTTTCTTTCTTCTCCTTTTTGCTTTTCATCAACAGGATGAAGCCATGGTGTAACTGCTACATCTGCAAGAGTTACTTGACCGTCAGCTGGGCCACAAAGTTCACCAACCTCTGCGACTGGTACACGCATCTTCTCCGGAAATCCCCATCGGCCACCATCCATGTGCATGTCTTGGGGAACACCATAACCGCCAACCCCGACAACGTCGAGCACATTCTCAAGACCAATTTCGAAAACTACCCCAAAGGGAAACCCTTCTCTGCCATCCTCGGAGACCTCCTCGGCCAAGGGATTTTCAACGTCGACGGCGATTCCTGGCTCTTTCAACGCAAAATGGCCAGTCTTGAACTCGGGAGCGTCGCGATTCGCTCCTACGCGATGGAGTTGGTCAACGAGGAGATCCACGCGCGCTTGCTTCCTTTCCTGGTCTCAACCGCGCGTGGCGAAAGGAACAAGGAAAAGGTCTTGGATTTACAAGACATCCTACGAAGATTTTCGTTCGACAACATCTGCAAAATATCGTTCGGTCTTGACCAGGGTTGTCTCCTTCCAACTCTCCCCGTTTCGGACCTCGCCGATGCGTTTGACCTAGCCTCAAAACTCTCCGCGGAACGCGCCATGACCGCGTCACCGTTCATTTGGAAAGCGAAGCGGCTTTTCGGAGTCGGTTCGGAGAAGCGGCTGAAAGAAGCTATCAAGGTCGTAAACGACGTCGCACACGACATGATAAAGGAGCGGAGGGAAATGGGGTTCAACTCGCAGAAAAACCTTCTCTCGCGGTTCATGGGATCCGTTGAAGATGACGCTTACTTAAGAGACATCGTGGTGAGTTTTCTTTTGGCAGGCCGTGACACCGTCGCCTCCGCGTTGACAGGCTTTTTTTCTCTGCTGTCGAAAAGCCCAGAAGTCGAGGCGCGGATCCGCGAGGAGGTGGGCCCGGGCCCTGAGCCCCCGACGTTTGATCAGATTCGAGAAATGCATTACCTGAACGCGGCGGTTCACGAGAGCATGAGGCTGTTTCCGCCCATTCAGTTCGACTCAAAGTTCGCCACAGAGGATGACGTGTTGCCAGATGGAACTTTTGTACGGAAGGGGAGTCGGGTCACTTATCACCCTTACGCCATGGGTCGGATGGAAAACATTTGGGGACCCGATTGCCTCCAATTTCGACCCGAACGGTGGTTGCGTGACGGAGTGTTTGTTCCACCGTGTCCTTTTAAATACCCTGTTTTTCAGGCTGGTGTAAGGGTGTGTTTGGGGAAGGATTTGGCTTTGACAGAAATGAAGTCAGTTGTGGTCGCTATGGTTAGGCAGTTTGAGATTCGGGTTGTTGAACCGGATCAGGAGCCCCGGTTTGTGCCTGGTCTAACAGCCACTTTACAAGGTGGGTTACCGGTTCGGGTTTTAGAAAGGAAATGTTAA 1500 0.52 MSFEGFLSLQSMPATCGFFFFAFTLLFSFFSFLLFINRMKPWCNCYICKSYLTVSWATKFTNLCDWYTHLLRKSPSATIHVHVLGNTITANPDNVEHILKTNFENYPKGKPFSAILGDLLGQGIFNVDGDSWLFQRKMASLELGSVAIRSYAMELVNEEIHARLLPFLVSTARGERNKEKVLDLQDILRRFSFDNICKISFGLDQGCLLPTLPVSDLADAFDLASKLSAERAMTASPFIWKAKRLFGVGSEKRLKEAIKVVNDVAHDMIKERREMGFNSQKNLLSRFMGSVEDDAYLRDIVVSFLLAGRDTVASALTGFFSLLSKSPEVEARIREEVGPGPEPPTFDQIREMHYLNAAVHESMRLFPPIQFDSKFATEDDVLPDGTFVRKGSRVTYHPYAMGRMENIWGPDCLQFRPERWLRDGVFVPPCPFKYPVFQAGVRVCLGKDLALTEMKSVVVAMVRQFEIRVVEPDQEPRFVPGLTATLQGGLPVRVLERKC 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01768 499 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g01768 499 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g01768 499 PRINTS P450 superfamily signature 444 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g01768 499 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g01768 499 CDD CYP86A 81 490 - -
Vimu5g01768 499 SUPERFAMILY Cytochrome P450 61 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g01768 499 Gene3D Cytochrome P450 53 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g01768 499 Pfam Cytochrome P450 86 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g01768 499 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g01768 499 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g01768 499 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g01768 499 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g01768 499 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g01768 499 PANTHER CYTOCHROME P450 34 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01768 Vimu-Chr5 29416701 29419035 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g01768 33 497 Cytochrome P450 AT2G27690 61.765 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01768 K20624 - gmx:100813091 845.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g01768 5 29416701 29419035 Vimu5g01768 5 29416701 29419035 ECH