Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01734 ATGCCATCTGTGGTTGCCAATAACACTCTCAAGTTCAGACAAAGGGAAGACCCGTCGTCCTTTTATGTTTTAAATATTGGACAATTTGTGTTAGTTCTCTGTAATGTAGCTGTGAATGCTATTCCACCCTTCTCCTTTTCATTGGGTATACTTTGGTGGATGGATCCACCCCAAAGCCTGAGTGAAGCAAAAGCAGCAACCATCCACCATTACAGTAAAAGCTTTCAAGGCTTCTCAGCTATGATTACACCTGAGCAAGCCACTCAACTAGCAGAACATAAATCGGTAGTGTCAGTTTTTGAGAGCAAAATGAATAAACTCCACACCACACATTCTTGGGATTTTCTTGGATTGGATACTATCTACAGAAACAATCCTAAAACACTGGACACTGCATCCGAAGTCATTGTTGGTGTCATTGACTCTGGAATCTGGCCGGAATCGCAAAGCTTCACTGATTATGCATTAGGCCCCGTGCCAAAAAAATTCAAAGGAGAGTGTGTCACTGGTGATAAGTTTACACTAGCCAATTGCAACAAGAAAATTATCGGTGCTCGATTCTATTCAAAAGGGTTTGAAGCAGAAAATGGTCCTCTAGACGGTGTTGTCAATAAGATATTTTTCCGGTCAGCTCGAGATAGTGATGGACATGGAACACACACAGCTTCTACAATAGCAGGGTCTACTGTTGCTAATGCCAGCTTACTTGGTATTGCCAAAGGAACAGCTAGAGGTGGTGCTCCAAGTGCTAGACTTTCCATCTACAAGGCCTGTTGGTTCGGGTTCTGCAGTGATGCTGATATTCTTTCAGCAGTGGATGATGCTATTCATGACGGCGTTGACATATTATCTCTTTCTCTTGGTCCTAATCCTCCCCAGCCAATTTACTTCGAAGATGCAGTCAGTTTAGGAACATTCCATGCATTTCGAAAGGGTGTTCTTGTTTCTGCTTCAGCTGGAAATTCAGTTTTTCCACGTACTGCATGCAATGTTGCTCCTTGGATCCTCACTGTTGCTGCTAGCTCCATAGACAGGGAGTTCAGTTCAAACATCTACCTTGGTAACTCAAAGGTCTTAAAGGGTTCTTCTTTGAATCCAATAAAAATGGAGCACCCGTATGGTTTGGTATATGGAAGTGCTTCTGCAGCTGCTGGAGTTTCAGCAGTAAATGCAAGCTTCTGCAAGAACAATACTCTAAATCCTACCTTAATCAAGGGTAAAATTGTGATCTGTACAATCGAGAATTTCAGTGATAACAGACAAGAGAAGGCCATAGAAATAAGGAAAGGTGGGGGTGTTGGAATGATACTTATTGATCATAATGCCAAAGATATTGGTTTTCAATTTGTCATCCCAAGCACTCTCATTGGTCAGGATGCTGTAGAAGAGCTCCAAGCATATATAAAGACAGATAAGAATCCTACTGCTAGAATCTACCCAACAATAACTGTAGTTGGTACCAAACCAGCACCAGAAATGGCAGCTTTTTCTTCAATGGGGCCAAATATAATAACACCCGACATTATTAAGGCAAGTTTACTTAGACTCATAAAGGATACAGAGGACATAGTGTTGAAGCCAGATATCACAGGACCTGGAGTGAATATTTTGGCAGCATGGTCTCCAGTAGCAACTGATGCCACAGTTGAACAACGACCTGTCAACTACAACATCATTTCAGGAACATCAATGTCTTCAACAGTTACTGATAACACACAGCACCTCATAAGAAGAGAACCAAATGGAACTCAAACCACACCATTTGACTATGGATCTGGACATGTTAACCCAGTTGCATCACTGAATCCGGGATTAGTATATGAATTTAATTCCCAAGATGTTCTGAATTTTCTGTGCAGCAATGGAGCAAACCCAGCACAACTTAAAAACCTCACTGGGGATATTACTCAATGCCAAAAACCTCTTACAGCTTCCTACAACTTCAACTATCCTTCCATTGGAGTGTCCAACTTGAATGGAAGTTTATCAGTTTATCGTACAGTTACTTACTATGGTCAGGAGCCAACAGTATATTCTGCAAGTATTGAAAATCCATCTGGTGTGAAGGTTACAGTTACTCCAGCAGAATTGAAGTTCTGGAAAACTGGGGAGAAGATAACTTTCAGGATTAATTTCTTCCCTTTCAAGACAAGCAATGGAAACTTTGTGTTTGGCTCCTTGGCATGGAATAATGGAAAACAAAGGGTTAGGAGTCCTATTGGTGTCAATGTTCAACTCAAACCAATATTGTCTGATTCAATGGCAGCAATATCAACTTCTATTGCCTGTGATCATCAGTGCATATGCTCTCTGAATCATGTGAAGCAAAGGCTGCTGCAATCTACCATTACAGTAAAAGCTTTCATGATCACTCCAGAGCAAGCTAAAAAACTTGCAGACTGCCTACGAGAATCATATGCACCATTGGACATTGCATCCGATGTCATTGTTGGTGTCATTGACTCTGGAATCTGGCCAGAATCGGAAAGCTTTAATGATTACGGATTAGGTCCTGTGCCTGAAAAGTTTAAAGGAGAGTGTGTTACTGCGGATAACTTTACACTAGCCAATTGCAACAAGAAAATTATTGGTGCACGGTACTATTCAAAGGGGTTTGAAGCAGAAAAGGGTCCTCTAGAGGGCACACTTTTCCGGTCAGCCCGAGATAGTGGTGGACATGGAACACACACGGCTTCAACAATAGCAGGGTCCATTGTTGCTAATGCCAATTTGCTTGGCATTGCCAAAGGAACTGCTAGAGGGGGTGCACCAAGTGCAAGACTTTCCATCTACAAGGTCTGTTGGTTGGGGTTCTGCAGTGATGCTGATATTCTTTCTGCCATGGATGATGCCATCCATGATGGAGTTGACATACTATCTCTCTCCCTTGGCCCTGGTCTTTCCCAGCCAATTTACTTTGAGGATGCAATCAGCATAGGATCCTTCCATGCTTTCCAAAAGGGAGTTTTTGTCTCTGCTGCAGCTGGAAACTCGTTTTTTCCAGGTACTGCATGTAATGTTGCTCCTTGGATCCTCACCGTTGCTGCTAGCACAATAGACAGGGAATTCAGTTCAAATATCTACCTTGGTAACTCAAAGATCTTAAAAGTGAAATTTATGTGCCTTCAGGGTTCTTCTTTGAATCCAACAAGAATGAAGCAATCGTATGGTTTGATATATGGAAGTGCCGCTGCAGCTGCTGGAGTTTCACCAATAAATGCAAGCTTCTGCAAGAACAATACTCTAGATCCTACGTTAATCAAGGGTAAGATTGTGATTTACACAATTGAGGATTTCTTGAGTGATGACAGACGAGAGAAGGCCTTAACAATAAGGCAAGGTGGGGGTGTTGGAATGATACTTAATGACCATAATGCCAAAGATTTTGGTTTTCAATTTGTCATCCCAACCACTCTCATTGGTCAGGACGCCTTAGAAGAGCTTCAAGTCTATACATTGACAGAGAAGTGA 3471 0.4195 MPSVVANNTLKFRQREDPSSFYVLNIGQFVLVLCNVAVNAIPPFSFSLGILWWMDPPQSLSEAKAATIHHYSKSFQGFSAMITPEQATQLAEHKSVVSVFESKMNKLHTTHSWDFLGLDTIYRNNPKTLDTASEVIVGVIDSGIWPESQSFTDYALGPVPKKFKGECVTGDKFTLANCNKKIIGARFYSKGFEAENGPLDGVVNKIFFRSARDSDGHGTHTASTIAGSTVANASLLGIAKGTARGGAPSARLSIYKACWFGFCSDADILSAVDDAIHDGVDILSLSLGPNPPQPIYFEDAVSLGTFHAFRKGVLVSASAGNSVFPRTACNVAPWILTVAASSIDREFSSNIYLGNSKVLKGSSLNPIKMEHPYGLVYGSASAAAGVSAVNASFCKNNTLNPTLIKGKIVICTIENFSDNRQEKAIEIRKGGGVGMILIDHNAKDIGFQFVIPSTLIGQDAVEELQAYIKTDKNPTARIYPTITVVGTKPAPEMAAFSSMGPNIITPDIIKASLLRLIKDTEDIVLKPDITGPGVNILAAWSPVATDATVEQRPVNYNIISGTSMSSTVTDNTQHLIRREPNGTQTTPFDYGSGHVNPVASLNPGLVYEFNSQDVLNFLCSNGANPAQLKNLTGDITQCQKPLTASYNFNYPSIGVSNLNGSLSVYRTVTYYGQEPTVYSASIENPSGVKVTVTPAELKFWKTGEKITFRINFFPFKTSNGNFVFGSLAWNNGKQRVRSPIGVNVQLKPILSDSMAAISTSIACDHQCICSLNHVKQRLLQSTITVKAFMITPEQAKKLADCLRESYAPLDIASDVIVGVIDSGIWPESESFNDYGLGPVPEKFKGECVTADNFTLANCNKKIIGARYYSKGFEAEKGPLEGTLFRSARDSGGHGTHTASTIAGSIVANANLLGIAKGTARGGAPSARLSIYKVCWLGFCSDADILSAMDDAIHDGVDILSLSLGPGLSQPIYFEDAISIGSFHAFQKGVFVSAAAGNSFFPGTACNVAPWILTVAASTIDREFSSNIYLGNSKILKVKFMCLQGSSLNPTRMKQSYGLIYGSAAAAAGVSPINASFCKNNTLDPTLIKGKIVIYTIEDFLSDDRREKALTIRQGGGVGMILNDHNAKDFGFQFVIPTTLIGQDALEELQVYTLTEK 1156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01734 1156 Pfam Peptidase inhibitor I9 61 107 IPR010259 -
Vimu5g01734 1156 Pfam Fibronectin type-III domain 647 742 IPR041469 -
Vimu5g01734 1156 CDD Peptidases_S8_3 813 1019 IPR034197 -
Vimu5g01734 1156 PRINTS Subtilisin serine protease family (S8) signature 132 151 IPR015500 -
Vimu5g01734 1156 PRINTS Subtilisin serine protease family (S8) signature 213 226 IPR015500 -
Vimu5g01734 1156 PRINTS Subtilisin serine protease family (S8) signature 560 576 IPR015500 -
Vimu5g01734 1156 ProSiteProfiles Serine proteases, subtilase domain profile. 792 1156 - -
Vimu5g01734 1156 Gene3D Peptidase S8/S53 domain 810 1120 IPR036852 GO:0004252|GO:0006508
Vimu5g01734 1156 Pfam Subtilase family 133 571 IPR000209 GO:0006508|GO:0008236
Vimu5g01734 1156 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 45 108 IPR037045 -
Vimu5g01734 1156 FunFam subtilisin-like protease SBT1.5 344 485 - -
Vimu5g01734 1156 Gene3D Peptidase S8/S53 domain 135 567 IPR036852 GO:0004252|GO:0006508
Vimu5g01734 1156 Gene3D - 618 745 - -
Vimu5g01734 1156 Pfam PA domain 390 464 IPR003137 -
Vimu5g01734 1156 SUPERFAMILY Subtilisin-like 814 1092 IPR036852 GO:0004252|GO:0006508
Vimu5g01734 1156 FunFam Subtilisin-like protease SBT1.5 134 365 - -
Vimu5g01734 1156 Pfam Subtilase family 813 1075 IPR000209 GO:0006508|GO:0008236
Vimu5g01734 1156 CDD Peptidases_S8_3 106 343 IPR034197 -
Vimu5g01734 1156 CDD PA_subtilisin_like 1026 1151 - -
Vimu5g01734 1156 ProSiteProfiles Serine proteases, subtilase domain profile. 112 444 - -
Vimu5g01734 1156 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 66 567 IPR045051 -
Vimu5g01734 1156 FunFam Subtilisin-like protease SBT1.5 814 1033 - -
Vimu5g01734 1156 CDD PA_subtilisin_like 350 478 - -
Vimu5g01734 1156 SUPERFAMILY Subtilisin-like 107 605 IPR036852 GO:0004252|GO:0006508
Vimu5g01734 1156 Gene3D - 344 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01734 Vimu-Chr5 29100935 29110508 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g01734 59 744 Subtilisin-like Serine Gene Family AT2G04160 39.946 1.60e-157 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01734 - - gmx:106794255 1649.8