Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01655 ATGGAGGCACTTGAAGTTGCAAGACTGCCACCGCCACCGACACTGTTGCAGCCACTGCCATCACCTATTTCTTTTGAATCGGCGGCAACACCTTCCACAACCCCCGAATCGATTGTCATAGATTCCGATCCCAAATCTTCCACATCACCAGTGTCAAACCCTGATTCTAGCAAGCTACTACCCTCGAAGGAGCAACACCACCTAGACCTACCGAACCATCATGAAATAATGCGTGCTGCAGTTAGTAGTAATTTGAAACCGGTTTCACTTGAATTAGGAAGCAATTCACCCGTCATAATTTTTTATGATGCTGATGTAAATAAAGCTGCCGAGCTTGCCCTCTTGGGCATCGTATTCAACAAGGGAGAAATCTGTGTTGCAGGTTCTCGTGTGCTTGTTCAAGAAGGGATTTATGATGAATTTGAGAAGAAATTGGTGGAGAAAGCAAAAGCTTGGGTGGTTGGTGATCCTTTTGATCCTAAAGTTCAAAAGGATTGA 498 0.4478 MEALEVARLPPPPTLLQPLPSPISFESAATPSTTPESIVIDSDPKSSTSPVSNPDSSKLLPSKEQHHLDLPNHHEIMRAAVSSNLKPVSLELGSNSPVIIFYDADVNKAAELALLGIVFNKGEICVAGSRVLVQEGIYDEFEKKLVEKAKAWVVGDPFDPKVQKD 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01655 165 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 74 92 IPR016162 GO:0016491
Vimu5g01655 165 SUPERFAMILY ALDH-like 74 163 IPR016161 GO:0016491
Vimu5g01655 165 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 95 162 IPR016163 GO:0016620
Vimu5g01655 165 MobiDBLite consensus disorder prediction 1 65 - -
Vimu5g01655 165 Pfam Aldehyde dehydrogenase family 75 163 IPR015590 GO:0016491
Vimu5g01655 165 MobiDBLite consensus disorder prediction 20 59 - -
Vimu5g01655 165 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 74 163 - -
Vimu5g01655 165 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 118 129 IPR016160 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01655 Vimu-Chr5 28137977 28138553 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g01655 75 164 Aldehyde Dehydrogenase Gene Family AT3G24503 66.667 3.40e-36 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01655 K12355 - gmx:100791396 162.155