Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01644 ATGTCTTCAACATTGGATTCCGAAGCCACCGTAGTAGAAGAGTGTCGCGGTGTTCTTCACGTTTATAGCGACGGTTCCATAGTACGTTCTTCGCGCCCAAGCTTCAACGTCCCCGTAGTCGACGACGGCACCGTTTTATGGAAAGATGTCGTTTTTCACCCTGCCCATGATCTTCAGCTTCGGCTCTACAAGCCAGCCGACTCAGCCGGCTCCAAGCTTCCCATCTTTTTCTACTTTCACGGTGGCGGCTTTTGCATCGGTTCACGCACTTGGCCTAATTGTCAAAACTACTGTTTTCGTCTTGCTTCCCAGCTTCGAGTTATAGTGGTAGCTCCAGATTACCGGCTGGCTCCCGAGAATCGACTCCCTGCCGCAATCGACGACGGCTTCACGGCTTTTAAGTGGCTTCAGACTCAAGCCGCGAGTAATGAGCCGGACCCATGGTTGAGCAACGTGGCTGATTTTAGCCGGGTGTTCATCTCGGGTGACTCGGCTGGAGGGAACATAGCTCACCATCTGGCGGCTGGACTTGGATTGGGGTCGCCCGAGTTGGAGCCGGTTCGGGTGAGAGGTTATGTTCTATTGGCACCTTTCTTTGGTGGAACTGTCCGAACGAAATCAGAAGCTGAAGGACCAAAAGATGCTTTTCTGAATTTGGAACTTATTGATAGGTTTTGGAGGCTTTCTATTCCGATTGGGGAAACTACAGATCACCCTATTGTGAATCCATTTGGGCCAAACAGTGAGAGCCTTGAAGGAAAAAATCTAGAAGCAATTCTGGTGGTGGCCGGAGGAGGCGATTTGCTTAAAGACAGAGCAGAGGATTATGTTAGGAGGCTTAAGGAATGGGGTAAAGATATAGAGTATGTGGAATTTGAAGGACAACAACATGGTTTCTTCACTATTGATCCTAATTCAGAACCCTCAAACAAGTTGATGTTTATCATCAAACATTTCATAGAGAAGCATTTCGGGAATGTTTGA 984 0.4837 MSSTLDSEATVVEECRGVLHVYSDGSIVRSSRPSFNVPVVDDGTVLWKDVVFHPAHDLQLRLYKPADSAGSKLPIFFYFHGGGFCIGSRTWPNCQNYCFRLASQLRVIVVAPDYRLAPENRLPAAIDDGFTAFKWLQTQAASNEPDPWLSNVADFSRVFISGDSAGGNIAHHLAAGLGLGSPELEPVRVRGYVLLAPFFGGTVRTKSEAEGPKDAFLNLELIDRFWRLSIPIGETTDHPIVNPFGPNSESLEGKNLEAILVVAGGGDLLKDRAEDYVRRLKEWGKDIEYVEFEGQQHGFFTIDPNSEPSNKLMFIIKHFIEKHFGNV 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01644 327 SUPERFAMILY alpha/beta-Hydrolases 15 324 IPR029058 -
Vimu5g01644 327 Gene3D alpha/beta hydrolase 16 322 IPR029058 -
Vimu5g01644 327 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 158 170 IPR033140 -
Vimu5g01644 327 Pfam alpha/beta hydrolase fold 77 300 IPR013094 GO:0016787
Vimu5g01644 327 PANTHER ARYLACETAMIDE DEACETYLASE 15 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01644 Vimu-Chr5 28024757 28025849 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g01644 11 321 Carbohydrate Esterase AT5G16080 35.241 5.04e-56 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01644 - - aprc:113858789 573.548