Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01558 ATGATTACTCTGTACCATAGCCCTTCTGACTTCGTCCAAATAATGGAGCTATTTTCATTTTCTTCCTCAACAGCAATAGTGTGTCTGGTGAGCGTGATCGTTGGTGTGATTCCGTTATGGGCGGTGAAGATGGTGTACACGCTGTGGCTTAGGCCTAAGAGGTTCGAGAAACTTCTGAGAGCACAAGGTCTTCGTGGTGACCCATACTCCCTTTCACTTTTCACCCCAAACCAAAACCCTACTCTACAAAACAACCCTCAATCGCAATCTTTTCTTGTCTCCGACGATGTTGCTCCTCGCTTGTCCTTGCTATCTAACAACACTGTTGCCAAATACGGCAAGAATTCCTATTTATGGGAAGGCCCAACACCAAAGGTCATCATCACTGATCCACATCAAATCAAAGAAGTCTTCAATAACATTCATGATTTCCAGAAACAAAAGATAAGTGGCATTGCCAAGTTCTTGATCAATGGTCTGATCAACTCAGAGGGTGATAAGTGGGTTCAACATCGAAAGATAATCAACCCTGCATTCCACTTGGAAAAATTGAAAAACATGCTCCCAGCATTTTCCCAAAGTTGCCATGATGTGATTAGCGAGTGGAAGGGAATGTTGTCATCAGTTGGAAAATGTGAGATTGACGTTTCGCCTTTCATTCAGAATTTGAGTCGTGATGTAATTTCTAGAACAGCATTCGGAAGCAGCTATGCAGAAGGAAAAAAGATATTTCAGCTTCTCAGAATTCAGGGGAACCTTGTCATGACTGGAAAGTACAATAACACACCAATATTGCGGCATTTACCAACACCTACCAAAATGAAGATGAGAGCAGCTGATAAAGAAATGAAAAATTCAATTGGGAATATCATAAAAGAACGGGAGAAAGCCATGAAGAAGGGTGAATCCAACAGTAAAGATTTATTGGGCATACTTTTAGAATCAAATCAAATGGAAATCCAGGCAAATGAAAACAGTAAGAGTGTTGGAATGACTATTGAAGAAGTAATTGGTGAGTGCAAGTTATTCTACATAGCAGGGCAAGAGACGACTTCATCTCTGCTGGTTTGGACATTGATCATGTTGAGTAGGTATCCTGAATGGCAAAAACGAGCAAGGGAGGAAGTTCTTCATGTTTTTGGAAAACAAAATCCAAACATTGATGGGATGAGTCAGCTCAAAACTATGACCATGATTCTGTATGAAGTTCTGAGGTTATTCCCTCCCATTGTTTTCCACAATCGCACACTCCAGAAGGATATGGAACTTGGGAACCTGTCACTACCTGCAGGAGTAAATGTTACCTTGCCAATTTTTTTACTTCATCAGGATGTTAATATCTGGGGTAATGATGCAATGAAGTTCAAACCAGAAAGGTTCTCTGAAGGTGTTGCTAAGGCAACAAAAGGCCAAGTTGTATTTTACCCATTTGGATGGGGTCCTAGAATTTGCATTGGCCAAAACTTTGCCTTGTTGGAGGCCAAGGTTGTGTTGTCATTGTTTCTGCAGAATTTCTCATTCGAGCTTTCTCCAGTTTATGTGCATGCTCCTGCAGTTATGCTTAGTTTGCAACCAAAACACGGTGCGCCACTTATTTTGCAAAAGCTATGA 1611 0.4109 MITLYHSPSDFVQIMELFSFSSSTAIVCLVSVIVGVIPLWAVKMVYTLWLRPKRFEKLLRAQGLRGDPYSLSLFTPNQNPTLQNNPQSQSFLVSDDVAPRLSLLSNNTVAKYGKNSYLWEGPTPKVIITDPHQIKEVFNNIHDFQKQKISGIAKFLINGLINSEGDKWVQHRKIINPAFHLEKLKNMLPAFSQSCHDVISEWKGMLSSVGKCEIDVSPFIQNLSRDVISRTAFGSSYAEGKKIFQLLRIQGNLVMTGKYNNTPILRHLPTPTKMKMRAADKEMKNSIGNIIKEREKAMKKGESNSKDLLGILLESNQMEIQANENSKSVGMTIEEVIGECKLFYIAGQETTSSLLVWTLIMLSRYPEWQKRAREEVLHVFGKQNPNIDGMSQLKTMTMILYEVLRLFPPIVFHNRTLQKDMELGNLSLPAGVNVTLPIFLLHQDVNIWGNDAMKFKPERFSEGVAKATKGQVVFYPFGWGPRICIGQNFALLEAKVVLSLFLQNFSFELSPVYVHAPAVMLSLQPKHGAPLILQKL 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01558 536 PRINTS E-class P450 group I signature 355 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g01558 536 PRINTS E-class P450 group I signature 484 507 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g01558 536 PRINTS E-class P450 group I signature 223 241 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g01558 536 PRINTS E-class P450 group I signature 335 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g01558 536 PRINTS E-class P450 group I signature 109 128 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g01558 536 PRINTS E-class P450 group I signature 474 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g01558 536 SUPERFAMILY Cytochrome P450 105 534 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g01558 536 PANTHER CYTOCHROME P450 FAMILY MEMBER 40 529 - -
Vimu5g01558 536 Gene3D Cytochrome P450 75 535 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g01558 536 PRINTS P450 superfamily signature 346 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g01558 536 PRINTS P450 superfamily signature 475 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g01558 536 PRINTS P450 superfamily signature 484 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g01558 536 PRINTS P450 superfamily signature 398 409 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g01558 536 Pfam Cytochrome P450 109 511 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g01558 536 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 477 486 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01558 Vimu-Chr5 27038280 27041165 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g01558 30 536 Cytochrome P450 AT3G14690 48.330 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01558 - K17873 gmx:100790445 740.339