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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Vimu5g01548
TCGAAGTCTCTGGCCGATACACTGGCGAGATGGAAAGAGTACAATGTTTGGCTTGAATCTAGCAATGAGGCTGAGAAACCAGTTAGGAAAGTTGCTGCCAAAGGATCAAAGAAAGGGTGTATGAAAGGTAAAGGAGGGCCTGAGAACACACTCTGTAACTACAGAGGAGTTAGGCAAAGAGCTTGGGGAAAATGGGTTGCTGAAATCCGGGAGCCAAATAGAGGGAGTAGGCTCTGGTTGGGTACTTTTTCCACTGCCATTAGTGCTGCTCTGGCTTATGATGAAGCAGCTAAGGCAATGTATGGTTCTGTTGCACGTCTTAACTTTCCCAACCTTGAAGTTTTAGCTTTATCTGAGGAATCATCAAGAAATTCCCCAGCTGGTAGTCAATGTGGTTCTGCAGTGATGATATCAGAGAGTTCTGAATGTATGATATTTCCAAATAGCTCTGAGGGAGACAAAGCTAAGGATGATGACATGGAAGGCATCTCCTTATCCTTAACTTAA
507
0.4418
SKSLADTLARWKEYNVWLESSNEAEKPVRKVAAKGSKKGCMKGKGGPENTLCNYRGVRQRAWGKWVAEIREPNRGSRLWLGTFSTAISAALAYDEAAKAMYGSVARLNFPNLEVLALSEESSRNSPAGSQCGSAVMISESSECMIFPNSSEGDKAKDDDMEGISLSLT
168
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Vimu5g01548
168
SUPERFAMILY
DNA-binding domain
53
110
IPR016177
GO:0003677
Vimu5g01548
168
CDD
AP2
52
112
IPR001471
GO:0003700|GO:0006355
Vimu5g01548
168
FunFam
Ethylene-responsive transcription factor 2
52
111
-
-
Vimu5g01548
168
PANTHER
DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C
2
141
-
-
Vimu5g01548
168
SMART
rav1_2
53
116
IPR001471
GO:0003700|GO:0006355
Vimu5g01548
168
Gene3D
AP2/ERF domain
53
111
IPR036955
GO:0003700|GO:0006355
Vimu5g01548
168
ProSiteProfiles
AP2/ERF domain profile.
53
110
IPR001471
GO:0003700|GO:0006355
Vimu5g01548
168
PRINTS
Ethylene responsive element binding protein signature
54
65
IPR001471
GO:0003700|GO:0006355
Vimu5g01548
168
PRINTS
Ethylene responsive element binding protein signature
76
92
IPR001471
GO:0003700|GO:0006355
Vimu5g01548
168
MobiDBLite
consensus disorder prediction
147
168
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Vimu5g01548
Vimu-Chr5
26900262
26900768
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Vimu5g01548
1
142
AP2-EREBP Transcription Factor Family
AT2G40340
53.425
2.85e-48
157
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
AP2 or ERF-ERF
Vimu5g01548
AP2
7.2e-15
CL0081
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Vimu5g01548
-
-
gmx:100783729
270.781
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Vimu4g00943
4
7830722
7831318
Vimu5g01548
5
26900262
26900768
PCT
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