Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01463 ATGAATCACATAAACACAATGTTTTTCTTTGAAGTGCCTTTTTCCAAATTGTTTCTTGTCGTTCTTTGGTCGTTTTCAACAGTTATCATATCTCTTGTTAATGTTGTCAGTTTACCAAACAATAATAGTGTTCCTGCGGTGTTTGTGTTTGGAGACTCCATAGTAGATACAGGTAACAATAACTACATTAAGACCATAGCCAAATGTGATTTTCGACCATATGGTAAAGATTTTGGTGAAGGAAATCAACCAACTGGGAGGTTCAGCAATGGTTTAGTCCCTTCAGACTTCATTGCTGCAAAATTTGAAGTGAAGAAGCTTTTGCCACCGTACCTTGATCCAAAGTTGAAACGTGAAGATCTCCTCACAGGTGTAAGCTTTGCATCTGGTGCTAATGGATATGATCCTCTAACTTCTAAAATAGCAGTAAATAATTGTTCCCACCTAAAACCTTACAATCAACTGGAGAAATTCAAGGAATACATAAAAAAGATACAGGGCATGGTTATGTCCAGAGAGGTAGAAGACGACTATAACCTTGACAAACTGTCTAGAATGCTTGAAGAAGTTAAGTTTCTACCTAGCTTAAAGGACAAGCTTACATTCCTTGGTGAGATAGAGAAGAAGGGATATGCATTTAGAGATGCCATAATCTTAATAAAAAAGAATAAAATGCAGGAACTTCATGGAGTTGGAGCTAGAAGAATTGGAATACTTGGTTTACCAAATGTAGGGTGTGTCCCCTTTGAAAGAACAATCAGAGGAGGACTTAAGAGAACATGTTCAGATGCTGACAATCAGGCTGCGATGTTGTTCAACAACAAGCTGTCATCCCAAATAGATATTCTTGGGAAAAACTTCCCTGATGCTAGACTTGTATACCTTGATATTTACAACGCTTTATCAGATATGACTCAAAACCCCTCTAAATATGGTTTTGAAGTAGCAGATAAAGGATGTTGTGGCACAGGAGATATTGAGGTAGGCTTTTTGTGTAACCCTGCCTTGAAGATATGTTCAAACAGGTCAAGTTATGTATTTTGGGACAGTTTCCATCCTACAGAAAGGGCCTATAATATACTTTCTTCTGAGGTGTTAGACAAAAATATCAACAAATTCTTCTGA 1125 0.3724 MNHINTMFFFEVPFSKLFLVVLWSFSTVIISLVNVVSLPNNNSVPAVFVFGDSIVDTGNNNYIKTIAKCDFRPYGKDFGEGNQPTGRFSNGLVPSDFIAAKFEVKKLLPPYLDPKLKREDLLTGVSFASGANGYDPLTSKIAVNNCSHLKPYNQLEKFKEYIKKIQGMVMSREVEDDYNLDKLSRMLEEVKFLPSLKDKLTFLGEIEKKGYAFRDAIILIKKNKMQELHGVGARRIGILGLPNVGCVPFERTIRGGLKRTCSDADNQAAMLFNNKLSSQIDILGKNFPDARLVYLDIYNALSDMTQNPSKYGFEVADKGCCGTGDIEVGFLCNPALKICSNRSSYVFWDSFHPTERAYNILSSEVLDKNINKFF 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01463 374 Gene3D SGNH hydrolase 205 370 IPR036514 -
Vimu5g01463 374 Gene3D SGNH hydrolase 34 175 IPR036514 -
Vimu5g01463 374 CDD SGNH_plant_lipase_like 45 369 IPR035669 -
Vimu5g01463 374 PANTHER GDSL ESTERASE/LIPASE EXL3 24 364 - -
Vimu5g01463 374 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 47 58 IPR008265 GO:0006629|GO:0016298
Vimu5g01463 374 Pfam GDSL-like Lipase/Acylhydrolase 47 364 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01463 Vimu-Chr5 25611274 25614925 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g01463 20 367 Pollen Coat Proteome AT1G75910 35.196 5.44e-56 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01463 - - gmx:100808475 416.772