Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01458 TACTATCAGAGAAACACAATGTTTTTCTCTAAAACTCCTTCTTCTCAATTGATTTTAGTCATTCTTTTGTCCTTTTCAACTATTATTCACAGTACCATCACAGAAACAAAATGTTTACAAAACAAAACTAGTGTTCCCGCACTGATTGTGTTTGGGGACTCCATACTAGATACAGGTAACAATGACTACATTTTGACTGCAATGAAATGTAATTTTCAACCATATGGTAAAGATTTTGGTGAAGGAAATCAACCAACTGGGAGGTTCAGCAATGGTTTAATCCCTTCAGATTTCATTGCTGAAAAATTACATCTCAAGAAGCTTTTGCCTCCGTATCTTGATCCAAATTTGAAACGTAAAGATCTTCTCACAGGTGTCAGCTTTGCATCTGGTTCCAATGGATATGATCCTCTAACTTCTAAACTAGCATTAGTGCTATCATTATCAGATCAACTAGACAAATTCATGGAATACAAAACCAAGATACATGACTTGGTTGGAGAAAAAAGAGCATCAATAATTATATCGAAAAGCATATACATCTTGAGCTCAGGAAGCAACGATATTGCCAATAATTTCTTTGCGTTACCATTTAGGAGACTAGAGTATAATATTGAAACTTACACAGATTTCTTGGTTTCAGAAGCTACCAAATTCTTACAAGATCTTTATGAACTTGGAGCTAGAAAGATTGGAGTACTTGGTTTGCCAAATTTAGGGTGTGTGCCTTCTCAAAGAACACTCAAAGGAGGATTTTTCAGGACATGTTCAAATCCTGAAAACCAGGCTGCAATGCTCTTTAACAAGAAGCTATCATCCCAATTAGATATCCTCGGGAAAAAATTTCCTGATGCTAAATTTGTCTACATTGATATTTACAGTATATTATCGGATATGGTTCAAAATCCCACTAAATATGGTTTTGAAGTAGCAGATAAAGGATGTTGTGGCACGGGAGATATTGAAGTAGGGCTTCTGTGTAACCCTCTTTCCTTGGGGATATGTTCAAACAGGTCAAATTACATATTTTGGGACAGTTTCCATCCCACGGAAAAGGCATATAATATTATTTCTACTGAGGTGTTTGATAAAAACGTCAATAAATTCTTCTAA 1113 0.3531 YYQRNTMFFSKTPSSQLILVILLSFSTIIHSTITETKCLQNKTSVPALIVFGDSILDTGNNDYILTAMKCNFQPYGKDFGEGNQPTGRFSNGLIPSDFIAEKLHLKKLLPPYLDPNLKRKDLLTGVSFASGSNGYDPLTSKLALVLSLSDQLDKFMEYKTKIHDLVGEKRASIIISKSIYILSSGSNDIANNFFALPFRRLEYNIETYTDFLVSEATKFLQDLYELGARKIGVLGLPNLGCVPSQRTLKGGFFRTCSNPENQAAMLFNKKLSSQLDILGKKFPDAKFVYIDIYSILSDMVQNPTKYGFEVADKGCCGTGDIEVGLLCNPLSLGICSNRSNYIFWDSFHPTEKAYNIISTEVFDKNVNKFF 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01458 370 PANTHER GDSL ESTERASE/LIPASE EXL3 24 360 - -
Vimu5g01458 370 FunFam GDSL esterase/lipase APG 37 366 - -
Vimu5g01458 370 Pfam GDSL-like Lipase/Acylhydrolase 49 359 IPR001087 GO:0016788
Vimu5g01458 370 CDD SGNH_plant_lipase_like 46 365 IPR035669 -
Vimu5g01458 370 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 48 59 IPR008265 GO:0006629|GO:0016298
Vimu5g01458 370 SUPERFAMILY SGNH hydrolase 161 363 - -
Vimu5g01458 370 Gene3D SGNH hydrolase 33 366 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01458 Vimu-Chr5 25580548 25582094 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g01458 44 361 Pollen Coat Proteome AT1G75910 43.344 2.91e-80 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01458 - - vum:124826430 535.028