Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01450 ATGCTTAAAAGTCTGGAGTTCTTTTTTGAGTTACCAATCATGGCGAATGTGGCGATTCTTGAGCTCAATAGAAACTGTGCCAAGACAGTGGAAGAGATAGTAAAATTAGAAAGAAAGATCTTTCCAAAACACGAATCACTAGCTTCATTCTTTCATGATGAACTGAAAAAGAAGAACAGTGGATTGCTTTATCTTCACGTGGATGGCGAGCTTGCAGGCTACGTCATGTATTCTTGGCCTTCTTCCCTGTACGCCTCCATCACCAAGCTCGCAGTGAAGGAGCAATATAGGGGACAAGGCCACGGAGAGACTCTGTTGAAAGCAGCAGTTGAGAAATGCAGGACAAGAAAAGTTTCGCGTATAATGCTTCATGTGGATCCCTTGAGGATTCCTGCAGTGAATCTTTACAAGAAATATGGTTTCCTAGTTGATACTCTGATTCAAGGCTATTACTCCTCAGACAGAAATGCTTATAGAATGTACCTGGACTTTGATTCAAGTTAA 504 0.4147 MLKSLEFFFELPIMANVAILELNRNCAKTVEEIVKLERKIFPKHESLASFFHDELKKKNSGLLYLHVDGELAGYVMYSWPSSLYASITKLAVKEQYRGQGHGETLLKAAVEKCRTRKVSRIMLHVDPLRIPAVNLYKKYGFLVDTLIQGYYSSDRNAYRMYLDFDSS 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01450 167 CDD NAT_SF 68 124 - -
Vimu5g01450 167 Gene3D - 20 163 - -
Vimu5g01450 167 Coils Coil 19 39 - -
Vimu5g01450 167 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 30 164 IPR016181 -
Vimu5g01450 167 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 15 166 - -
Vimu5g01450 167 Pfam Acetyltransferase (GNAT) family 32 141 IPR000182 GO:0016747
Vimu5g01450 167 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 17 165 IPR000182 GO:0016747
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vimu5g01450 Acetyltransf_1 5.4e-18 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01450 - - gmx:100808090 280.026