Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01343 ATGATGAAATTCGGTTTCATGTCCTTTCTTCTCACCATCATGTCGGAAGTGCCAATATCGAAAATATGCATCAACAAGGATGTGGCAACATATTTTCTGCCATGCAAAGATGCTGCAGAATTAACAGGGTTATCAGCTACTCATACATCAACCTCAGAATTTGACGTAGCTCCTGCAACAAACGAATCTGAAGTTGAGGTCAACTATTGTGAAGCAAAGGGTATGGTTAGTTTAATTTCAAGTGATGGAATCCTGCAACTGAATATATTCATCTCCTTTCTGGCTGTGTTTCACATATTGTTCTGTACATTGACAATGTGCCTCGGGAAGGCAAAGATGAGAAGATGGAAAAGATGGGAGGAGGAGACTCGAACACTGGAATATCAGATAGCTAATGACCCAAGAAGGTTCCAGTATACAGGTCAAACAATGATTGGAAAACGTCATTTGAATTTCTGGAGTTATCATTCTCCCTTGCTTTGGATGGCTAATATTTCTTTAGGCAGCAATTTCAACTTCAAGAAATTTCTTTCCCGCACTTATGATGAAGATTTCCAGAAGGTTATGGGAATCAGGTATGATCAAATCAGAAACAAGGCAAACCCAGTGATCAAAGGAAGTCTACTTGTAACACCCAGTGATGCCCATTTCTGGTTTCATAGACCTGAATGGCTTCTGCATTTACTCAAGTTCATCCTTATCCAGTCATCTGTTACTGTTTTTGACAGAACTCCTTTCAACTTGCATTCTTCACCTGGACTTGGGTCTTGCTTCAATAGAGAAAATGAGGACATTGGCATAAGGATTGGAATGGGTATAGCTGTGCAGCTTCTTTGTGGTTATGTCACCCTTCCCCTTTTTGCACTTGTTACTCAGATGGGTTCTAGCATGAGGAGAGAAATTTTCACTGAGAGGGTTTCTATGGGCCTCAAAAATTGGCACAAAAGGGCTAAACAATCTCTGCAGAACAACTCAACTTCAAGAAAACACTCAGATTCTTTGCATTCAAAAGGAGGTGACAATTCAGCAAGAGGAACAATGCATAGTTTGAACAACCCAGATATTGTAGTGGTCACAAACAACCCTTCTCCCTCTAATGAGGGAGAGAGCATTGCTCCCACCAATAATGAGCAAGATGTATCAAGTCCTTCGACTTCAGAAATCACAGCTACTGAGGAAGAGAATTCCAAGATCATCACCAGAGGAACCTATGACGGTGAGATCTCATTTGGTAGCAGCTGGAAGAATTTAGGAAGTGGCAGAGGCATTGGAGAAATTGTCTCAATAACTGAAGAAGATGATGCTGAAAAATTATCTGAATTTATCCATAGATAA 1335 0.4045 MMKFGFMSFLLTIMSEVPISKICINKDVATYFLPCKDAAELTGLSATHTSTSEFDVAPATNESEVEVNYCEAKGMVSLISSDGILQLNIFISFLAVFHILFCTLTMCLGKAKMRRWKRWEEETRTLEYQIANDPRRFQYTGQTMIGKRHLNFWSYHSPLLWMANISLGSNFNFKKFLSRTYDEDFQKVMGIRYDQIRNKANPVIKGSLLVTPSDAHFWFHRPEWLLHLLKFILIQSSVTVFDRTPFNLHSSPGLGSCFNRENEDIGIRIGMGIAVQLLCGYVTLPLFALVTQMGSSMRREIFTERVSMGLKNWHKRAKQSLQNNSTSRKHSDSLHSKGGDNSARGTMHSLNNPDIVVVTNNPSPSNEGESIAPTNNEQDVSSPSTSEITATEEENSKIITRGTYDGEISFGSSWKNLGSGRGIGEIVSITEEDDAEKLSEFIHR 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01343 444 MobiDBLite consensus disorder prediction 317 393 - -
Vimu5g01343 444 PANTHER MLO-LIKE PROTEIN 1 201 394 IPR004326 GO:0006952|GO:0016020
Vimu5g01343 444 MobiDBLite consensus disorder prediction 338 393 - -
Vimu5g01343 444 Pfam Mlo family 196 337 IPR004326 GO:0006952|GO:0016020
Vimu5g01343 444 Pfam Mlo family 1 164 IPR004326 GO:0006952|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01343 Vimu-Chr5 23893954 23900451 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g01343 1 396 MLO family AT2G39200 32.661 1.51e-78 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01343 K08472 - gmx:100789563 625.55