Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01334 ATGGGGTGGTGGCAAAGAGGCCACACCACTGGCCGGGGATCATCAGCCACCGTCTCCACCGCCACCTGCTGCGCCGGTGGCGCTGTCTTTGCCGTGAAGTCCGTGGAGCTGTCTCAATCGGAGTCTTTGAAAAGGGAGCAGAAGATTTTGTCCTCTGTAAGTAGTCTATGTGGTTGCGTACAAAGGGTGTGGCGTTACGATGGAAAACAACAAGCTCTTGTTCAACCTCTTCATGGAGCACATGCCCTTTGGCACGGTTGCTCAGGAGACTCACCGGCGGTGGCCGGCTCGAGGAAGCGGCTATGGCACGTTACACCAGGCAAATTGTGCAGGGGCTAG 339 0.5693 MGWWQRGHTTGRGSSATVSTATCCAGGAVFAVKSVELSQSESLKREQKILSSVSSLCGCVQRVWRYDGKQQALVQPLHGAHALWHGCSGDSPAVAGSRKRLWHVTPGKLCRG 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01334 112 Gene3D Phosphorylase Kinase; domain 1 2 62 - -
Vimu5g01334 112 SUPERFAMILY Protein kinase-like (PK-like) 4 63 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01334 Vimu-Chr5 23715677 23717074 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g01334 4 55 MAP Kinase Kinase Kinase AT1G05100 61.538 8.52e-13 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01334 K20716 - csin:114294283 77.7962