Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01304 ATGAATTCCCATTGCTTCTTACGTTTTCCTTTATCATGTTTTTTTCTCTTCGCTTTCGTCCCATGTTTTTCACACCCTTCACTCCTTGGCGTACACCCCCTAGATGAGAAATATTATAGCTCTGAGGTGATCAAGTGCAGGGATGGATCAAAATCCTTCACCAGAGACCGTCTTAATGACAATTTCTGTGACTGCCCTGATGGCACTGATGAACCTGGGACTTCAGCTTGCCCTGCGGCAAAGTTTTATTGCAGAAACCTTGGTAGCAAACCACAGTTTATAGTTTCTTCTCATGTTAACGATCACTTTTGTGATTGTTGTGACGGGAGTGATGAACATGATGGAATCATTTGTTGCCCAAACACATGTGTCATGGGTGGAAATGCAGAGTCGAAAATTAGCTTTTGCAAGTCAAATAAAAAAGAAGTGAAGTCGGACGAATCAGTTCATAACGTTACTGGTAATTTGTTTGAAGTTGGTGTTTATTCTACAAATGGTTCTGGTTATTTTTCTGGTATTTCTCTGGAGTTTCCGATGCCGCACCAGATCAAGAAAGAGACTTCACCATTGAATTGA 576 0.408 MNSHCFLRFPLSCFFLFAFVPCFSHPSLLGVHPLDEKYYSSEVIKCRDGSKSFTRDRLNDNFCDCPDGTDEPGTSACPAAKFYCRNLGSKPQFIVSSHVNDHFCDCCDGSDEHDGIICCPNTCVMGGNAESKISFCKSNKKEVKSDESVHNVTGNLFEVGVYSTNGSGYFSGISLEFPMPHQIKKETSPLN 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01304 191 Pfam Glucosidase II beta subunit-like 25 144 IPR028146 -
Vimu5g01304 191 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 10 143 IPR039794 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01304 Vimu-Chr5 23067336 23071779 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g01304 28 129 Calmodulin-binding Proteins AT5G56360 66.019 1.04e-41 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01304 - - gmx:100783506 278.87