Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01188 ATGGCTGATGCAGTCCAACTATTAATTGATGCTGCAAAGGAGTACTTGGGGAAACTGGAAGATAGCACAAGCACAAACACTATAAAACCCACTGCAACAACATTGTATCCACGCACTGAAAGGAAGAGAAAGAAAAAATTTGTCAGCAAAGAGTCTCTGCTGAAAGTTTTGGATTCTACCATAAAGCTTTGGGAATTGTGCCCACCTGCTAGTCCATGGGAAGGTCCTTCTCCACATGATAATTGCCTGATGTTTTGTCAATTAATGAGGCCTTACTTGGAGGAGTTAAAGCAGCAAATGGAGGAAAGCCAAAGTATTGATGTCAAGCCTTGGGATGATGAGACCGACATGAAGAAGCTGGAAGAGGTTGTCCGCAATATTGAGATGCCTGATCTTAGCATTAAAAACTTGTCATTTCTTGCTAAACGCAGATTATTAGGTAACCTGCTCAGCTGCGAGGACTCCAGTGGTATGGGAGTTGTGACTGGTATTAGAGTAACTCCTGGAATTACCGGCAGTTTTGACAAAGCTCCTGGAATTTCCGGTGGGAAAAGCATTTTCCGGGGTTTAAAACCGCCGGATACCTTCATACACAACATTAGTTTGAGGAGAGGGGAGAGTCCAATACAGAGAGGGGAGAGTCCATGTTGTTTGGTGGAGAAAGATCGTTGGTTCAGTTCGAAGAGGCAAGTTTCATTGGATCCATAG 708 0.4379 MADAVQLLIDAAKEYLGKLEDSTSTNTIKPTATTLYPRTERKRKKKFVSKESLLKVLDSTIKLWELCPPASPWEGPSPHDNCLMFCQLMRPYLEELKQQMEESQSIDVKPWDDETDMKKLEEVVRNIEMPDLSIKNLSFLAKRRLLGNLLSCEDSSGMGVVTGIRVTPGITGSFDKAPGISGGKSIFRGLKPPDTFIHNISLRRGESPIQRGESPCCLVEKDRWFSSKRQVSLDP 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01188 235 Gene3D - 97 143 IPR014717 -
Vimu5g01188 235 Pfam EF-1 guanine nucleotide exchange domain 106 136 IPR014038 GO:0003746|GO:0006414
Vimu5g01188 235 SUPERFAMILY eEF-1beta-like 105 137 IPR036219 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01188 Vimu-Chr5 20495826 20499714 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g01188 97 132 Eukaryotic Initiation Factors Gene Family AT5G19510 66.667 1.01e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01188 K03232 - atr:18442837 55.8398