Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01182 ATGGCAGATGAGGTCGTTTTGCTAGATTTCTGGGCGAGTCCTTTTGGGATGAGGGTGAGGGTTGCACTTGCTCAAAAGGGTATAAACTATGAGCGCAAAGAAGAGGATCTCAAGAACAAGAGTTCCTTACTCCTACGAATGAACCCGGTTCACAAGAAAATTCCGGTTCTTATCCATAACGGAAAACCCATTTGTGAATCTCTCATTATTGTTCAATACATTGAGGATGTTTGGAATCACACAAATCCCCTGCTGCCTTCTCACCCTTACCAGAGAGCACAGGCAAGATTTTGGGCTGATTATGTTGACACCAAGATAGTTAATATCTTAGAGAAGATATCGAAAGTAAAAGGAGAAGAAATTGAAGTTGCAAAGAAAGAGTTGACAGAAGCACTTAAATTATTGGAGGAAGAACTGGGAGATAAAACTTATTTTGGAGGAGAAAATCTTGGTTTTGTGGACATAGCACTTGTCTCATTCTATCCTTGGATAAAATCCTTTGCAACTTTTGTCACCCTTAACATAGATGCTGAGTGTCCTAAGTTGATTGCTTGGGGCAAGATGTGCCTTCAAAAAGAAAGTGTTGCTAAGTCTCTTCCTGGTGAGCACGTGATCGATGAGTTCACTAGAAAGATCTTCAACATGCAGTAA 651 0.4055 MADEVVLLDFWASPFGMRVRVALAQKGINYERKEEDLKNKSSLLLRMNPVHKKIPVLIHNGKPICESLIIVQYIEDVWNHTNPLLPSHPYQRAQARFWADYVDTKIVNILEKISKVKGEEIEVAKKELTEALKLLEEELGDKTYFGGENLGFVDIALVSFYPWIKSFATFVTLNIDAECPKLIAWGKMCLQKESVAKSLPGEHVIDEFTRKIFNMQ 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01182 216 Pfam Glutathione S-transferase, N-terminal domain 6 75 IPR004045 -
Vimu5g01182 216 SFLD Main (cytGST) 2 212 - -
Vimu5g01182 216 Gene3D Glutaredoxin 1 87 - -
Vimu5g01182 216 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 213 IPR010987 -
Vimu5g01182 216 CDD GST_N_Tau 5 78 - -
Vimu5g01182 216 Pfam Glutathione S-transferase, C-terminal domain 116 191 IPR004046 -
Vimu5g01182 216 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 200 IPR045073 -
Vimu5g01182 216 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Vimu5g01182 216 SFLD Main.3: Omega- and Tau-like 2 212 IPR045073 -
Vimu5g01182 216 Gene3D - 88 216 - -
Vimu5g01182 216 Coils Coil 118 138 - -
Vimu5g01182 216 CDD GST_C_Tau 89 212 IPR045074 GO:0004364|GO:0006749
Vimu5g01182 216 FunFam Tau class glutathione S-transferase 1 87 - -
Vimu5g01182 216 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Vimu5g01182 216 SUPERFAMILY GST C-terminal domain-like 76 214 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01182 Vimu-Chr5 20394958 20396229 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g01182 1 212 Glutathione S-transferase Gene Family AT1G78380 59.906 1.06e-96 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01182 K00799 - gmx:547520 317.775