Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01179 ATGGGAGGTAGAAACATTGTTTTGGTTGATGCTGTAAGTTGTAGAATAACATTTCTTAGTGACATACCGACTATAAAATTTGGAGAAAATGTTACTCACCCAGAAAATGGGGAAGAGTCCAGCCCTTCAATTCCAGTTGCTCATAGGCAGGAACATATACAAGACTTGTACAAAATGTGGCATGATCTTGTTTGTGGCTTAGTTAGTGGTGGCATGATCCGCACTTCCAAGAGAGTTAAAGTCATCCTTGAAGATGGTGTCAACTCTACCTTGTGGACCACCTTTAGAGCCATTATGAAGCAAGGCTTGAAGAGTAGTTTGGACATCCAAACCAAGTGGAAAGTGTGTGCCATGTGTCATGCTTCCATTGGAGAGGATTTGCTTTTTAAAAGGAGTGGAGAGGATTTACTTTTAGTAGTGGCCACATGGCACTCTAGGAATGGATAG 447 0.4161 MGGRNIVLVDAVSCRITFLSDIPTIKFGENVTHPENGEESSPSIPVAHRQEHIQDLYKMWHDLVCGLVSGGMIRTSKRVKVILEDGVNSTLWTTFRAIMKQGLKSSLDIQTKWKVCAMCHASIGEDLLFKRSGEDLLLVVATWHSRNG 148
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01179 Vimu-Chr5 20354407 20355459 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g01179 1 74 Eukaryotic Initiation Factors Gene Family AT5G43810 61.702 9.98e-30 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01179 K11593 - gmx:100819073 112.464