Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu5g01152 | ATGATTACTCCGACCCAACCCCTGAGAGATAGTATCAATGAGAATGTCACTCTTGTCTCAACAAATGGAACCTTTGAAGCAGGATTCTTCAGCCCTGGAAATTCCCGTATCCGTTACCTTGGAATTTGGTACAAAACCATATCCCCCAGAACAGTGGTTTGGGTGGCCAACAAAGAAACACCACTTCAAGACCATTCTGGAGTCTTAGAACTAGACAGTGATCAAGGGCTTCTTAGTATAAAAAATGGCGCAGGAGCCAAAATATGGTCCTCAAATGCATCATACATACCAAGCAAACCAGTTTTTGTGGAGTTGTTGGAATCAGGAAACATGGTTGTGAAAGATGGCCATGATGATAACTTTTTATGGGAAAGCTTTGATTACCCTGGTGATACTTTTCTTCCAGGAATGAAGCTTGGAATGAACTTGAAAACTGGTCATCAGCGAGCTCTGAGATCTTGGAAATCCCTCAACGATCCTAGTCCAGGTGAATTTTCATTTGGTGTTGATACTCGTGGCCTTCCTCAACTAGTTATCACGAAGAGTGATGACATAGTTTATAGACCAGGCTCTTGGAATGGTGTTAGAGTCACAGGAGTACCTGCACAAGAGGCTCACCCATTAACCACATCCCTTTTTGTTATGAATGAAGATGAAATCTTCTATGAGATTCAACTCTTGAATAGTTCAACTAAACTGAGAAGCAGATTGCTCCCAGAAGGGTATCAAATACGTTTATTATGGTCAGATGAGGGTGAAAAATGGGATACTGTATACTCTGGTTCGTTTGATGAGTGTGAGAGTTATGGTATGTGTGGTGCTAATAGTATTTGCAACGTGAGTGGAGCACCTCAACACTGCGAATGTTTGAGTGGATTCAAATCCAAAGCTGCAGATTCAACTTGTGATCGAATTAGAGCTCTAGATTGCAACAAGGGAGATAGTTTTAAGAAGTACGAGGGAATGAAATTGCCAGACACATCTTCATCTTGGTATGATGCGAGAATGAGTCTTGAAGAATGCGAGAAATTGTGCTTGAGCAACTGCTCTTGTACTGCGTATGCTCAATTGAATATCAGTGCCAACGGAAGTGGCTGCTTGCAATGGTTTAATGACATTGTTGACATCAGGACACTGGCACAGGATGGACAAGATTTTTATCTGAGAATTGCAGCTTCGAAATTTCAAGATCTGATAATTTTTTTAGTGGCAGAAACAAAATACTGGAAGGAGAAGAATAAGAAGGATGACATTGATTTACCAATATTCGATTTTTTATACATCTGCAATGCCACAAATAACTTTTCTGAGAGTAATAAATTAGGACAAGGGGGATTTGGACCAGTGTACAAGGGCATATTATCAGATGGGCAAGAAATTGCAGTTAAGAGGCTTTCCAAAACTTCGGGACAAGGTTTGGAAGAGTTTAAGAATGAAGTAATGTTGATTGCAAAACTTCAACACCGCAATCTGCAAGAGGAAAAGCTGCTAATTTATGAATTCATGCCAAATAGAAGCTTGGATTACTTTATTTTTGATTCAACAAGAAGTACATCAATAGGTTGGGCTAAGAGATTTGAAATTATTGATGGAATTGCTAGAGGACTCCTCTATCTTCATCAAGATTCTAGACTGAAAATCATTCATAGGGATCTCAAGACTAGTAATGTTCTTCTTGACAGCAATATGAAACCAAAAATATCAGATTTTGGTATGGCTAGGACATTTAACCTAGATCAAGATGAAGGAAACACAAATAAAGTGATGGGAACATATGGTTATATGCCTCCTGAATATGCTGTGCATGGATCATTTTCAGTCAAATCAGATGTATTTAGTTTTGGGGTAATTGTATTGGAGATAATAAGTGGGAGGAAGAATAGAGGATTCCGTGACCCAGATAATGAGCTAAATCTTCTTGGACATGCATGGAGATTATGGATTGAGAAAAGGCCGATGGAACTAATGGGTGAGTCAATGGAGAATGCAGTTGGTCGATCTGAAATATTAAGATATATTCATATTGGTTTGTTGTGCGTACAACATAGACCAGAGGATAGACCAAACATGTCTTCGGTAGTTTTAATGTTGAACGGTGAAAAGTTATTGCCTGAGCCAAGTCAACCTGGATTTTACACGGGAAGAAATAACTTGACCATGACAGATTCTTCTTTAAGAAATTTGGATGCGTATTCTCTCAACGAAATGTCTGAGACATTGCTTCTGGCTAGATAG | 2235 | 0.3915 | MITPTQPLRDSINENVTLVSTNGTFEAGFFSPGNSRIRYLGIWYKTISPRTVVWVANKETPLQDHSGVLELDSDQGLLSIKNGAGAKIWSSNASYIPSKPVFVELLESGNMVVKDGHDDNFLWESFDYPGDTFLPGMKLGMNLKTGHQRALRSWKSLNDPSPGEFSFGVDTRGLPQLVITKSDDIVYRPGSWNGVRVTGVPAQEAHPLTTSLFVMNEDEIFYEIQLLNSSTKLRSRLLPEGYQIRLLWSDEGEKWDTVYSGSFDECESYGMCGANSICNVSGAPQHCECLSGFKSKAADSTCDRIRALDCNKGDSFKKYEGMKLPDTSSSWYDARMSLEECEKLCLSNCSCTAYAQLNISANGSGCLQWFNDIVDIRTLAQDGQDFYLRIAASKFQDLIIFLVAETKYWKEKNKKDDIDLPIFDFLYICNATNNFSESNKLGQGGFGPVYKGILSDGQEIAVKRLSKTSGQGLEEFKNEVMLIAKLQHRNLQEEKLLIYEFMPNRSLDYFIFDSTRSTSIGWAKRFEIIDGIARGLLYLHQDSRLKIIHRDLKTSNVLLDSNMKPKISDFGMARTFNLDQDEGNTNKVMGTYGYMPPEYAVHGSFSVKSDVFSFGVIVLEIISGRKNRGFRDPDNELNLLGHAWRLWIEKRPMELMGESMENAVGRSEILRYIHIGLLCVQHRPEDRPNMSSVVLMLNGEKLLPEPSQPGFYTGRNNLTMTDSSLRNLDAYSLNEMSETLLLAR | 744 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu5g01152 | 744 | ProSiteProfiles | PAN/Apple domain profile. | 310 | 391 | IPR003609 | - | |
Vimu5g01152 | 744 | FunFam | Os08g0179000 protein | 405 | 501 | - | - | |
Vimu5g01152 | 744 | PANTHER | BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN | 2 | 684 | - | - | |
Vimu5g01152 | 744 | CDD | B_lectin | 11 | 129 | IPR001480 | - | |
Vimu5g01152 | 744 | Pfam | S-locus glycoprotein domain | 187 | 296 | IPR000858 | GO:0048544 | |
Vimu5g01152 | 744 | Gene3D | Phosphorylase Kinase; domain 1 | 403 | 501 | - | - | |
Vimu5g01152 | 744 | CDD | PAN_AP_plant | 308 | 391 | - | - | |
Vimu5g01152 | 744 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 547 | 559 | IPR008271 | GO:0004672|GO:0006468 | |
Vimu5g01152 | 744 | ProSiteProfiles | Protein kinase domain profile. | 435 | 703 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu5g01152 | 744 | SMART | serkin_6 | 435 | 695 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu5g01152 | 744 | Pfam | D-mannose binding lectin | 51 | 155 | IPR001480 | - | |
Vimu5g01152 | 744 | SMART | blect_4 | 9 | 129 | IPR001480 | - | |
Vimu5g01152 | 744 | ProSiteProfiles | Bulb-type lectin domain profile. | 3 | 126 | IPR001480 | - | |
Vimu5g01152 | 744 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 502 | 705 | - | - | |
Vimu5g01152 | 744 | SMART | ntp_6 | 311 | 390 | IPR003609 | - | |
Vimu5g01152 | 744 | Gene3D | Transferase(Phosphotransferase) domain 1 | 502 | 703 | - | - | |
Vimu5g01152 | 744 | Gene3D | Hepatocyte Growth Factor | 307 | 390 | - | - | |
Vimu5g01152 | 744 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 3 | 126 | - | - | |
Vimu5g01152 | 744 | Pfam | Protein tyrosine and serine/threonine kinase | 438 | 695 | IPR001245 | GO:0004672|GO:0006468 | |
Vimu5g01152 | 744 | SUPERFAMILY | Protein kinase-like (PK-like) | 420 | 712 | IPR011009 | - | |
Vimu5g01152 | 744 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 52 | 160 | IPR036426 | - | |
Vimu5g01152 | 744 | PIRSF | SRK | 401 | 744 | IPR024171 | GO:0004674 | |
Vimu5g01152 | 744 | PIRSF | SRK | 1 | 407 | IPR024171 | GO:0004674 | |
Vimu5g01152 | 744 | Gene3D | - | 3 | 126 | IPR036426 | - | |
Vimu5g01152 | 744 | Pfam | PAN-like domain | 310 | 376 | IPR003609 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu5g01152 | Vimu-Chr5 | 19315297 | 19320085 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu5g01152 | 423 | 711 | Receptor kinase-like Gene Family | AT4G23230 | 56.522 | 9.95e-119 | 369 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Vimu5g01152 | PK_Tyr_Ser-Thr | 2.8e-37 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu5g01152 | - | - | vum:124820888 | 1388.63 |