Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01136 ATGGCCACATTCATTTTTAGGTCTAACAAAACAGTGCATGCTTTTGTTGGATGGCTTTGTATTCTGCTGATGGTTCAAAAGGGTGCTTCCTATGATTTTGTAGTTGGTGGCCAAAAGGGTTGGAGTGTTCCAAATGATTCCAGTTTCAATCCTTTCAATCAATGGGCAGAAAAGAACCGTTTTCAAGTTGGAGACTCCCTTGTGTTCAACTACCAATCTGGGCAAGACTCAGTGCTGTATGTAAAGAGTGAAGACTATGCGAGCTGCAACACCGATTCACCTTATTCAAAATTCTCTGATGGACACACAGTCTTCAAGCTAGACAAATCAGGGCCTCACTTTTTTATAAGTGGAAGCAAAGACAACTGCCTGAAAAATGAGAAGTTAACAGTGATTGTGCTTGCTGAAAGGAACAGAAACAACAATCAAAGCACCAATGCTTCTCCACCTTCACCACAATCATCATCTTCATCACCAGCACCTACTACTGGGCAAGAGGGTCAATCTCCACCTTCAGACACAAACCAAACACCAAGCCCTGTTAGTGAACCTCCACCTCCTAATGCTGCTGCTTCAGCCTTTGTCTCTCTTGCTGCCTCTGTTGGAGCATTCATGGTTTCAGTCATCATGCTTTTATCTTTCTAA 645 0.4295 MATFIFRSNKTVHAFVGWLCILLMVQKGASYDFVVGGQKGWSVPNDSSFNPFNQWAEKNRFQVGDSLVFNYQSGQDSVLYVKSEDYASCNTDSPYSKFSDGHTVFKLDKSGPHFFISGSKDNCLKNEKLTVIVLAERNRNNNQSTNASPPSPQSSSSSPAPTTGQEGQSPPSDTNQTPSPVSEPPPPNAAASAFVSLAASVGAFMVSVIMLLSF 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01136 214 SUPERFAMILY Cupredoxins 30 134 IPR008972 -
Vimu5g01136 214 Gene3D - 31 147 IPR008972 -
Vimu5g01136 214 ProSiteProfiles Phytocyanin domain profile. 31 135 IPR003245 GO:0009055
Vimu5g01136 214 MobiDBLite consensus disorder prediction 137 176 - -
Vimu5g01136 214 PANTHER BLUE COPPER PROTEIN 31 158 IPR039391 GO:0009055
Vimu5g01136 214 CDD OsENODL1_like 31 134 IPR041846 -
Vimu5g01136 214 Pfam Plastocyanin-like domain 41 125 IPR003245 GO:0009055
Vimu5g01136 214 FunFam Early nodulin-like protein 9 31 145 - -
Vimu5g01136 214 MobiDBLite consensus disorder prediction 137 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01136 Vimu-Chr5 18987454 18988679 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g01136 17 194 Phytocyanin Superfamily AT3G20570 48.603 7.09e-51 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01136 - - gmx:100781182 311.227