Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01129 ATGCAGTTTGTTATTACGATTTTCATGTCCATGTTACAAAATATGGAACCACTTGACATGGAAGTAGTTGACTTGGAAGCAGTGGAGTTGGAAGGAGTTCCTTCCTGTGAGGTTAACACAGATGACGTGGATAATGTGGACAATAATGTTCCAAAACTGCAGATGTCTTTCGATACAATAGATCAGGTGAAAAGTTTTTATAGAGACTATGCCGTCAGATGTGGTTTTGCTGTTCGGATAAGGAGCTCCAAGAAAAATAACAATAATCAATTGACGTTCATGAAATTAGTGTGTTCTCGGCAAGGGAAGTACATTTCTTCCATTTCTCCAGAGTTCAAAACTCAGCCCAGTCAAAGAAACGAATGCCCTGCTGGAATCACAGTTTCTCTTAAAGAAGGAAGATGGTATGTAGGGACAGTTGTCACCGAACACAACCATGACATGTGTCCGAAGAACTCAAACCTTATTCGTGGTAATCGAAAACTAAATATGCATTCGAAGCACACTCTTACCATGAATGATGACGCTGGTGTGCGCATTAACAAAAGCTTCATATCATTGGTTAATGATGCTGGTGGATATGAAAACATACAGTTCATTGAACGTGACGCAAGAAATTATATTGGCCAGCAGCGAAGGAGTTTTTGTAAGGATGGAGATGGGCAAGCACTTCTAAAATACTTTTCAAGAATGAGAGAATTGAACAACGAATTCTTCTATGAGATTGAAATGGACGAGCATAACAGAATTTGTAGTGTGTTTTGGGCTGATGCACGCAGTCGTGCAGCTTGTGTAGATTTTGGTGATGTCGTCTCATTCGACACAACCTACCTAACAAACAAATATGACATGCCGTTTGCTCCATTCGTTGGAGTTAATCATCATGGTCATTCGATATTACTTGGTTGTGCTTTGATTTCAGCTGAGGACACTTCAACATTCACATGA 948 0.3987 MQFVITIFMSMLQNMEPLDMEVVDLEAVELEGVPSCEVNTDDVDNVDNNVPKLQMSFDTIDQVKSFYRDYAVRCGFAVRIRSSKKNNNNQLTFMKLVCSRQGKYISSISPEFKTQPSQRNECPAGITVSLKEGRWYVGTVVTEHNHDMCPKNSNLIRGNRKLNMHSKHTLTMNDDAGVRINKSFISLVNDAGGYENIQFIERDARNYIGQQRRSFCKDGDGQALLKYFSRMRELNNEFFYEIEMDEHNRICSVFWADARSRAACVDFGDVVSFDTTYLTNKYDMPFAPFVGVNHHGHSILLGCALISAEDTSTFT 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01129 315 PANTHER OS01G0519700 PROTEIN 46 315 - -
Vimu5g01129 315 Pfam MULE transposase domain 270 315 IPR018289 -
Vimu5g01129 315 Pfam FAR1 DNA-binding domain 65 149 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01129 Vimu-Chr5 18902739 18903686 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vimu5g01129 FAR1 7.3e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01129 - - vra:106763416 468.003