Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01127 ATGGGTGGCATAGGAAAGACTACTCTTGCTCGAGCTTTATACGAAAGAATCTATCATCAATATGATTTTCATTGTTTTATTGATGATGTAAGTAAAATATATCGAGATTCAAGTTCACTAGGTGTACAAAAGCAGTTGATTTCTCAGTCTTTAAATGAGAAAAATCTAGAGATTTCAAACTCTTTTGAGGGAACATGTTTGATGTGGTCTAGGCTGCACAATGTTAGGGCACTTGTAGTTCTGGACAATGTTGATGAAGTTGAACAACTAAAGATGTTTACAGGGAACAGAGACACTTTGTTGCGTGAATGCTTAGGTGGAGGGAGCATAATCATCATAGTTTCTAGAGATGAACATATATTGAGGACACATGGAGTAGATGACATTTATCAAGTCCCTCCATTGAATGACGAAAATGCTATGCAACTGTTATGTAGAAAGGCTTTCAAACTTAATTATATTTTGAGTGATTATGAAAGGCTGGCATTTGATGTACTATCTCATGCTCAGGGCCATCCCTTGGCAATTGAAGTAATTGGGTCATCTTTGTTTGGTCGAAATGTGTCACAATGGAAAAGTGCAGTGGCCAGGCTAAAAGAAATAAAAAATAAAAATATTATGGATGTTTTGCGTATAAGTTTTGATCAACTGGATGAAGAAGACAAAGAAATATTTTTGGATATTGCATGTGCCCTTTGCAAGCATGACGAGAAATATGTGAAGGAAGTTCTAAACTTTCGCGGATTTCATCCTGAATACAGTCTACAAGTTCTACATGACAAATCACTAATAATAAAACAGGATGGGCATATTTATATGCATAGGTTATTGAATGACTTGGGCAGGTATATTGTCAAAGAAGAATCACATAAGGAACCCCAAAAAAGTAGGTTGTGCGATTACCAAGATTTCTGCAAAGTTATGGCGAACAATTAG 936 0.359 MGGIGKTTLARALYERIYHQYDFHCFIDDVSKIYRDSSSLGVQKQLISQSLNEKNLEISNSFEGTCLMWSRLHNVRALVVLDNVDEVEQLKMFTGNRDTLLRECLGGGSIIIIVSRDEHILRTHGVDDIYQVPPLNDENAMQLLCRKAFKLNYILSDYERLAFDVLSHAQGHPLAIEVIGSSLFGRNVSQWKSAVARLKEIKNKNIMDVLRISFDQLDEEDKEIFLDIACALCKHDEKYVKEVLNFRGFHPEYSLQVLHDKSLIIKQDGHIYMHRLLNDLGRYIVKEESHKEPQKSRLCDYQDFCKVMANN 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01127 311 Gene3D - 1 127 IPR027417 -
Vimu5g01127 311 Pfam NB-ARC domain 1 205 IPR002182 GO:0043531
Vimu5g01127 311 Gene3D - 134 218 IPR042197 -
Vimu5g01127 311 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 307 IPR044974 GO:0006952
Vimu5g01127 311 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 228 IPR027417 -
Vimu5g01127 311 PRINTS Disease resistance protein signature 169 183 - -
Vimu5g01127 311 PRINTS Disease resistance protein signature 71 85 - -
Vimu5g01127 311 SUPERFAMILY "Winged helix" DNA-binding domain 205 307 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01127 Vimu-Chr5 18897066 18898001 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g01127 1 298 WRKY Transcription Factor Family AT5G45050 35.117 1.14e-47 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01127 - - vra:106780741 597.045