Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01121 ATGATCTGCCCTCGATTTATAGATCCTTTTGCTGAGGCAAATGCTGATGACTCGGGTGCTGGGTCAAAGGAGTATGTGCATATTCGCGTACAGCAGCGAAATGGTAGAAAAAGCCTAACAACTGTTCAAGGATTGAAAAAAGAATTCAGCTATAACAAGATACTTGGTTTCCATGATTCTGAAACCAACAATAGACGTTGTATTCTCCGATTAATTACTCAGATACATCATATCTATTCTGTCTCCCAACGTAGAGATCAGATCCGCGAGATTGCAGAAAAACTCAGGGAGTACGGGAAAATCCGAGAATACAGCATTTATGGTTGGTTTCATAATCATGGAAACCGAGTAAAACGATGCTTGCCGCAAAACGTCTCCGATATATCTGAATCTTCGTACTACCTCCTACTGTCGTTTATGTATGATCCTTTATGGGTAATTCCATAG 447 0.4049 MICPRFIDPFAEANADDSGAGSKEYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILGFHDSETNNRRCILRLITQIHHIYSVSQRRDQIREIAEKLREYGKIREYSIYGWFHNHGNRVKRCLPQNVSDISESSYYLLLSFMYDPLWVIP 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01121 148 Pfam Translation initiation factor SUI1 23 54 IPR001950 GO:0003743|GO:0006413
Vimu5g01121 148 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 6 57 - -
Vimu5g01121 148 ProSiteProfiles Translation initiation factor SUI1 family profile. 26 99 IPR001950 GO:0003743|GO:0006413
Vimu5g01121 148 Gene3D - 4 63 - -
Vimu5g01121 148 SUPERFAMILY eIF1-like 2 56 IPR036877 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01121 Vimu-Chr5 18851035 18851602 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g01121 4 106 Eukaryotic Initiation Factors Gene Family AT1G54290 50.962 1.37e-27 97.4