Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01098 ATGGTGGGCACTCCTATTAATGGAAGAACAAGGCAAGCTTTCACAGTTGTCAATGGCGGTGGCCACGATCTTGGCCCCAGTAGTGCTCCTCCAAGCAATGCTGGATCGGATTATGGTGCCATAGAGTTCACAAGAGAGGACGTGGAAGCATTGCTAAATGAGAGAGCCAAGAGAAAAGACAGATTTAATTATAAGGAAAGATGTGAAAATATGGTGGATTATATAAAAAGGCTTAAGGTTTGCATCAGATGGTTCCAAGACCTTGAGATGTACTACTCGCTAGAGCAGGAAAAGTTAAAGAATTCACTGGAATTGACCCAGCAAAAATGCACAGAAATTGAGTTGCTGCTTAAAATCAAGGAAGAAGAATTAAATTCAATTATTACGGAAATGAGAAGGAATTGCACTTCTTTGCAAGAAAAACTGATAAAGGAAGAAACAGAAAAGACGGCTGCAGTGGAATCTCTTACTAAAGAGAGAGAGGCTAGGCTTGACATTGAGAGGTCACATAGTACTCTGTCAGAGGACCTTGGAAGAGCCCAACGAGAAATCCAAAGTGCAAATCAGAAGATAGCATCACTAAATGAAATGTATAAGCGGTTACAGGATTACATAACAAGCTTACAACAATACAATGGAAAACTTCATTCTGAGCTTTCATCAGTTGAAGATGAACTTAAACGCGTAGAGAAAGAGAAAGCTAATGTAGTGGAGAACATCACCATGTTAAGGGGTCAACTTACTGTTTCAGTTTCTTCTCAAGAAGAGGCCATAAAACAGAAGGATGTCTTGGCTACAGAAGTTTCGTCTCTTAGAGGAGAGTTGCAGCAAGTAAGAGATGAGAGAGATAGGCAATTATCTCAAGTACAAACTCTAAGTTCTGAATTAGAGAAAATTAAAGAATCTACTAAACAGTCTTCCACTGAAGTGGACAGCTTGACATTAAAAGCGAATGACCTGGAGGTAAAATGTGCATTGAAAGATAATCAGATAAAGGCCTTGGAAGAGCAGCTAGCAACTGCAGAGAAGAAACTGGAGGTGTCTGATATATCTGCATTCGAGACAAGGACAGAGTTTGAAGGACAACAGAAGTTTGTAAATGAGTTACAAAGACGGTTGACGGATGCAGAATATAAACTTATAGAAGGGGAGAGGCTTCGGAAAAAATTGCATAATACCATTTTGGAGTTAAAAGGTAATATTCGTGTATTCTGTCGGGTGAGGCCTTTATTACCTGATGAAAGTTGTAGCACAGAAGGCAAGATTTTCAGTTATCCAACATCAATGGAAACTTCTGGACGAGCCATTGACCTGGCCCAAAATGGCCAAAAGCATGCTTTTACATTTGATAAAGTTTTTACACCAGAGGCATCACAAGAAGAAGTTTTTGTAGAAATTTCACAGCTTGTACAAAGTGCTCTCGATGGTTATAAGGTTTGCATATTTGCCTATGGTCAGACAGGTTCAGGGAAAACCTATACAATGATGGGAAGGCCTGGACATCCTGAGGAAAAGGGCTTGATACCTCGTTCATTAGAACAAATATTTCAAACAAAGCAGTCTCAGCAACCTCAAGGCTGGAAATATGAAATGCAGGTGTCAATGTTGGAAATATACAATGAAACTATTCGAGATCTGATATCTACAACAACTCGTGTGGAAAATGGTACTCCTGGAAAACAATATACAATCAAACATGATGCAAATGGAAATACACAAGTTTCTGATCTTACAGTAGTGGATGTTCAAAGTGCTAAAGAGGTTGCATTTCTTTTAAATCAAGCAGCAAATAGCAGATCTGTGGGAAAAACCCAGATGAATGAACAATCATCAAGAAGTCATTTCGTATTCACTCTTCGAATATACGGTGTAAATGAGAGCACTGACCAACAAGTACAAGGTGTTCTGAATCTCATTGATCTTGCTGGTAGCGAGCGTCTTTCAAAGAGTGGATCAACTGGGGACAGGTTGAAAGAAACTCAAGCAATCAACAAAAGTTTATCATCACTGAGTGATGTTATATTTGCCTTAGCCAAGAAGGAGGATCATGTTCCATTCAGAAATTCAAAGCTCACATATCTCCTTCAGCCATGCCTAGGTGGAGACTCCAAGACACTAATGTTTGTGAACATTTCACCTGATCCTTCTTCTGTTGGTGAGTCACTGTGCTCACTCAGATTTGCATCAAGAGTCAATGCTTGTGAGATTGGAACACCTAGGCGTCAAACCAATGGACGTACCATGGAGTCTCGTTTGAGCTATTTCTGA 2268 0.3981 MVGTPINGRTRQAFTVVNGGGHDLGPSSAPPSNAGSDYGAIEFTREDVEALLNERAKRKDRFNYKERCENMVDYIKRLKVCIRWFQDLEMYYSLEQEKLKNSLELTQQKCTEIELLLKIKEEELNSIITEMRRNCTSLQEKLIKEETEKTAAVESLTKEREARLDIERSHSTLSEDLGRAQREIQSANQKIASLNEMYKRLQDYITSLQQYNGKLHSELSSVEDELKRVEKEKANVVENITMLRGQLTVSVSSQEEAIKQKDVLATEVSSLRGELQQVRDERDRQLSQVQTLSSELEKIKESTKQSSTEVDSLTLKANDLEVKCALKDNQIKALEEQLATAEKKLEVSDISAFETRTEFEGQQKFVNELQRRLTDAEYKLIEGERLRKKLHNTILELKGNIRVFCRVRPLLPDESCSTEGKIFSYPTSMETSGRAIDLAQNGQKHAFTFDKVFTPEASQEEVFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPGHPEEKGLIPRSLEQIFQTKQSQQPQGWKYEMQVSMLEIYNETIRDLISTTTRVENGTPGKQYTIKHDANGNTQVSDLTVVDVQSAKEVAFLLNQAANSRSVGKTQMNEQSSRSHFVFTLRIYGVNESTDQQVQGVLNLIDLAGSERLSKSGSTGDRLKETQAINKSLSSLSDVIFALAKKEDHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPDPSSVGESLCSLRFASRVNACEIGTPRRQTNGRTMESRLSYF 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01098 755 CDD KISc_C_terminal 398 736 - -
Vimu5g01098 755 SMART kinesin_4 398 742 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu5g01098 755 Coils Coil 317 351 - -
Vimu5g01098 755 ProSitePatterns Kinesin motor domain signature. 634 645 IPR019821 GO:0003777|GO:0005524|GO:0007018
Vimu5g01098 755 PRINTS Kinesin heavy chain signature 635 653 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu5g01098 755 PRINTS Kinesin heavy chain signature 604 621 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu5g01098 755 PRINTS Kinesin heavy chain signature 684 705 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu5g01098 755 PRINTS Kinesin heavy chain signature 476 497 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu5g01098 755 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 359 732 IPR027417 -
Vimu5g01098 755 ProSiteProfiles Kinesin motor domain profile. 400 734 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu5g01098 755 Gene3D Kinesin motor domain 341 736 IPR036961 -
Vimu5g01098 755 Coils Coil 366 386 - -
Vimu5g01098 755 Coils Coil 170 204 - -
Vimu5g01098 755 Coils Coil 261 302 - -
Vimu5g01098 755 PANTHER KINESIN-LIKE PROTEIN KLP-3 48 742 IPR027640 GO:0003777|GO:0007018
Vimu5g01098 755 FunFam Kinesin-like protein 346 736 - -
Vimu5g01098 755 Coils Coil 103 148 - -
Vimu5g01098 755 Pfam Kinesin motor domain 406 732 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu5g01098 755 Coils Coil 212 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01098 Vimu-Chr5 18460099 18466170 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g01098 85 748 Calmodulin-binding Proteins AT5G65930 31.493 7.04e-79 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01098 K10405 - gmx:100788335 1400.19