Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01086 ATGGAGAAGGAAGAAAAAAAGAAGATAAAGGGAAGCATTAAGGATAATATGCCAACAGTTTGGTTCTCTCTGAAGAAGTCTTTACACTGCAAATCTGAACCATCTGATGTTCATGACCCCAAAACAAGGAAGCATTTGAGCACAATCTTGACCAAGAGAGCAGGGAGGTCAGGGTGTTCCAGGTCCATAGCAAATCTCAAGGATGTAATCCATGGAAGCAAGAGGCACCTTGATAAGCCACCAAGTTGCAGTCCAAGATCCATAGGGAGCAGCGAGTTCCTCAACCCCATAACTCATGAGGTGATTTTAAGCAACTCAAGGTGTGAGCTGAAGATAACTGGGTATGGAGGCTTCCAAGAAGGAGTTGGCAGTGGTGGTAGCAATGCTGGTGGAGGTAGTGGTGGTTCAACTTTTGTGGGGACTTTGAGGCCAGGGACTCCTGGCCCTGGAGGGCACCCTACAATGCATTACTTTAATCCTTCTTTTAGGACCTCATCCACCCCTCCAAGGAAATCTCCTTTCCTCTTATCAGATAAAGAAGGGTCTGGTCCTCCTGGGCTTCAACCCAGTACTAGGTTGTCTCTCGAGACAGATTCTAACGGGTCTTCAACTGTGACTTGCCACAAATGTGGAGAGCAATTCAACAAATGGGATGCTGCTGAAGCTCATCATCTGTCTAAGCATGCTGGTAACAATTGTTTTCTCTTTTATTTTTCCTAA 720 0.4569 MEKEEKKKIKGSIKDNMPTVWFSLKKSLHCKSEPSDVHDPKTRKHLSTILTKRAGRSGCSRSIANLKDVIHGSKRHLDKPPSCSPRSIGSSEFLNPITHEVILSNSRCELKITGYGGFQEGVGSGGSNAGGGSGGSTFVGTLRPGTPGPGGHPTMHYFNPSFRTSSTPPRKSPFLLSDKEGSGPPGLQPSTRLSLETDSNGSSTVTCHKCGEQFNKWDAAEAHHLSKHAGNNCFLFYFS 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01086 239 ProSitePatterns Zinc finger C2H2 type domain signature. 207 228 IPR013087 -
Vimu5g01086 239 MobiDBLite consensus disorder prediction 158 172 - -
Vimu5g01086 239 MobiDBLite consensus disorder prediction 126 201 - -
Vimu5g01086 239 MobiDBLite consensus disorder prediction 187 201 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g01086 17 229 C2H2 Transcription Factor Family AT5G54630 58.130 4.36e-74 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Vimu5g01086 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01086 - - gmx:100787790 389.423