Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01085 ATGGTTTTGAAGTGTTTAATGACCTCCAAGTTTGTTACTATATTTGTAGTTTCTTTTGACATTTTTATGGCATCATATTCGTGTATTTCTTTTTTAAGAGCAATAAATTTTGACTTGGCAGTGACTGAACTCGTGGAAGGAGATTCATCAAGGAAAATAGTGGAGATCATATGCAGGACTAGCTGGTTGAAGTCTGAAAACCAGTGTGGTAGAATTGAGCGAGTTTTGAAAGTGCACAACATGCAAAAGACTCTTGCAAGATTTGAAGAGTACAGGGAGATGGTGAAGATCAAAGCCAGCAAACTCCAAAAGAAGCATCCAAGATGTCTGGCTGATGGAAATGAACTTTTGAGGTTCTATGGTACTACTGTTGCATGTTCTCTTGGCCTTAATGGTTCTTCTAGTCTCTGCCTATCAGAAAAGTGCTGTGTTTGCAGAATCATAAGAAATGGCTTTTCAGCGAAGAAGGAGCTCAAGGGTGGCATTGGAGTCTTCACAACATCAACAAGTGGAAGAGCTTTTGAGTCCATAGAGATTTTTGGTGATGAACCATCACTGAGAAAAGCACTGATAGTGTGCAGAGTAATTGCTGGCAGGGTTCATAGGCCACTAGAAAACATTCAGGAAATGGCAGCACAAACAGGATTTGATTCATTGGCTGGGAAAGTTGGTCTATATTCAAACATTGAGGAGCTTTATTTGCTCAATCCTAGAGCTCTTCTTCCTTGCTTTGTGGTAATCTGCAAACCTTGA 753 0.3997 MVLKCLMTSKFVTIFVVSFDIFMASYSCISFLRAINFDLAVTELVEGDSSRKIVEIICRTSWLKSENQCGRIERVLKVHNMQKTLARFEEYREMVKIKASKLQKKHPRCLADGNELLRFYGTTVACSLGLNGSSSLCLSEKCCVCRIIRNGFSAKKELKGGIGVFTTSTSGRAFESIEIFGDEPSLRKALIVCRVIAGRVHRPLENIQEMAAQTGFDSLAGKVGLYSNIEELYLLNPRALLPCFVVICKP 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01085 250 Gene3D - 36 249 - -
Vimu5g01085 250 FunFam C2H2-like zinc finger protein 40 249 - -
Vimu5g01085 250 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 40 248 - -
Vimu5g01085 250 SUPERFAMILY ADP-ribosylation 41 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01085 Vimu-Chr5 18047790 18048542 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g01085 40 250 C2H2 Transcription Factor Family AT5G54630 80.734 3.09e-127 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01085 - - lang:109355134 402.519
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g01085 5 18047790 18048542 Vimu5g01085 5 18047790 18048542 ECH