Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu5g01083 | ATGAGAGAGGAGTCAATAGGGATAGTTATCGGGGTTTCCATAGGGGTGGTTATTGGACTGGTTTTGGCAATTTTTGCATTCTTCTGCCACAGGTATCATCGGAAGCGTTCACAGATAGGCAATAGCAGTTCTAGAAGGGCTGCTACCATTCCAATCCGCGCACATGGTGCTGATTCTTGCACCATTCTATCAGACTCAACCTTAGGTCCAGAGTCACCCATAAAGTCTGGAAGGTATGGCCTTCCCTTCTGGCTTGAAGGGTTTAAGAAGAGTAGTAACATGGTCCCAGCATCTGGCCTACCTGAATATGCATACAAGGATTTGCAGAAAGCAACACATAATTTTACAACAGTCATAGGACAAGGTGCATTTGGTCCGGTTTATAAAGCTCAGATGTCTACTGGTGAGATTGTTGCAGTTAAAGTTCTTGCAACTAATTCTAAGCAAGGGGAGAAAGAATTTCACACAGAGGTCATGTTGTTGGGAAGGTTACACCACAGAAATCTGGTGAATTTGGTTGGATATTGTGCAGAAAAGGGGCAACATATGCTTGTATATGTATACATGAGTAATGGTAGCTTGGCATCCCACTTGTATGGTAGTGATGTGAATGAAGCACTGTGCTGGGATTTGAGGGTCAACATAGCTTTAGATGTGGCAAAAGGCTTGGAGTATCTTCATGATGGGGCAGTTCCCCCTGTAATCCATAGAGACATCAAATCTTCCAATATTCTGTTGGATCAATCCATGCGAGCCAGGGTTGCTGATTTTGGACTTTCAAGAGAAGAGATGGTGGACAAACATGCAGCTATTAGGGGTACCTTTGGCTATCTTGACCCTGAGTATATATCTTCAGGAACATTCACCAAGAAAAGTGATGTATACAGTTTTGGAGTGTTGCTATTTGAAATTATAGCTGGCAGAAATCCTCAGCAGGGTCTTATGGAATATGTTGAGCTTGCATCAATGAACATAGAGGGAAAAGTTGGGTGGGAAGAGATTGTGGATTCTCACCTTCAAGGAAACTTTCATGTGAAGGAACTGAATGAAGTTGCAGCAATAGCTTACAAATGCATCAACCGTGCACCAAATAAACGTCCTTCTATGAGGGACATTGTGCAAGTGTTAACAAGGATCCTTAAATCAAGGCACCATGGGAATCATCACAAAGATTCCTTGTCAGCCACAGATGAAGTTTTCATTGATCCTGACCAGCTAGAGACCATGATTTCAGTCACTGACCACAGGAGAGAAGAATCTAAGGATAATCCTGCGACAGAGGTGTACGATGAGTAG | 1296 | 0.4298 | MREESIGIVIGVSIGVVIGLVLAIFAFFCHRYHRKRSQIGNSSSRRAATIPIRAHGADSCTILSDSTLGPESPIKSGRYGLPFWLEGFKKSSNMVPASGLPEYAYKDLQKATHNFTTVIGQGAFGPVYKAQMSTGEIVAVKVLATNSKQGEKEFHTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVYMSNGSLASHLYGSDVNEALCWDLRVNIALDVAKGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAAIRGTFGYLDPEYISSGTFTKKSDVYSFGVLLFEIIAGRNPQQGLMEYVELASMNIEGKVGWEEIVDSHLQGNFHVKELNEVAAIAYKCINRAPNKRPSMRDIVQVLTRILKSRHHGNHHKDSLSATDEVFIDPDQLETMISVTDHRREESKDNPATEVYDE | 431 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu5g01083 | 431 | SUPERFAMILY | Protein kinase-like (PK-like) | 101 | 389 | IPR011009 | - | |
Vimu5g01083 | 431 | Gene3D | Phosphorylase Kinase; domain 1 | 86 | 188 | - | - | |
Vimu5g01083 | 431 | FunFam | calcium/calmodulin-regulated receptor-like kinase 1 | 189 | 397 | - | - | |
Vimu5g01083 | 431 | SMART | serkin_6 | 113 | 380 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu5g01083 | 431 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 234 | 246 | IPR008271 | GO:0004672|GO:0006468 | |
Vimu5g01083 | 431 | ProSiteProfiles | Protein kinase domain profile. | 113 | 380 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu5g01083 | 431 | FunFam | Calcium/calmodulin-regulated receptor-like kinase 1 | 86 | 188 | - | - | |
Vimu5g01083 | 431 | MobiDBLite | consensus disorder prediction | 411 | 431 | - | - | |
Vimu5g01083 | 431 | Gene3D | Transferase(Phosphotransferase) domain 1 | 189 | 401 | - | - | |
Vimu5g01083 | 431 | PANTHER | OS01G0750732 PROTEIN | 6 | 390 | - | - | |
Vimu5g01083 | 431 | Pfam | Protein tyrosine and serine/threonine kinase | 115 | 376 | IPR001245 | GO:0004672|GO:0006468 | |
Vimu5g01083 | 431 | CDD | STKc_IRAK | 119 | 379 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu5g01083 | Vimu-Chr5 | 18013643 | 18017081 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu5g01083 | 103 | 402 | Glycoside Hydrolase | AT3G07070 | 42.812 | 8.24e-74 | 235 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-I-2 | Vimu5g01083 | PK_Tyr_Ser-Thr | 2.5e-52 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu5g01083 | - | - | gmx:100785634 | 762.296 |