Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00966 ATGAAAAAGATCAATCTTTTACTCAGAAAATGCAAGAGTTTGTCAAGGCAACTAGGGAGATCTTCATCATACAGTAGCCTGAGGTCCAAATCCACAAAAGAAGACATATGGGGTGGGCATGGCATGCAAGAAGATGAACATTGTGAAACAGTGTTTGTTGGTAGCACAAGAAAACGGTATGTGATCAGCAAAAAGTATCTGAACCATCCTCTTCTGAACGAACTTATCAACAAGTCAAAACCAAAGGGTAGTGAAGAAAGTAGTGTTTTGGTGGTGAACTGTGAGGTGGTTCTCTTTGATCATCTTTTGTGGATGCTAGAAAATGCAGATCCTAAGTTTAGTTCTGAGTCTTTGGAGGAATTGACTGAACTCTATGTGTTTTGA 384 0.3932 MKKINLLLRKCKSLSRQLGRSSSYSSLRSKSTKEDIWGGHGMQEDEHCETVFVGSTRKRYVISKKYLNHPLLNELINKSKPKGSEESSVLVVNCEVVLFDHLLWMLENADPKFSSESLEELTELYVF 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00966 127 PANTHER EXPRESSED PROTEIN 7 126 - -
Vimu5g00966 127 Pfam Auxin responsive protein 31 106 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00966 Vimu-Chr5 14089179 14090478 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g00966 50 108 Calmodulin-binding Proteins AT5G20810 36.667 8.69e-07 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g00966 - - gmx:100500162 208.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g00966 5 14089179 14090478 Vimu5g00966 5 14089179 14090478 ECH