Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00958 ATGAGAAGTTACCATTTGGATTTTTTTGATAGAAATGGAGAATTTGTTGAGAGTTATATAAAAGCAAACAAGAGAATTGATGCTGGTGGGGATGTACTTGGCTGTTTTTGTTTCTTGCAGGTTGGAACCATGACTCTGGTTTGGAGCTTGAGCCAAGCGGAATTTGTGGAGGGGGAGACAGAAGAGAGTGACTTAACTCCCAATAAAGAGGAACCTACAAAGGGGAGAGAGCTGCTGGAAGCATTGAAAGACATCAAAGATCATCTTCTTCGGACTTATAGTTTTGAAAAAGAGTTGAACAAGGTTGTTAGTGGACCAAGAAGCCCAGGAGTTATTGGTGAACGGGGATCAAGAGAAAATTCCTCTGCTTCTGAATGGTCACAAAGGGATGACATTCCCTACTGGTTTGATCAGCAAAGCTATGACAGTGAAGGGCAAGGATCTCAGGATGGCAATAGATGGTCATCACACCCCCATTCTTCTCTAACTCAGCTATATGACTCAAGGCCCTTGTACAGAACATCTTCATATCCCGAGCAGCAGCGACAGCTGCAACACCAACTCCAACATTGCTCTAGTGAACCCGTTCCTAACTGGTTTGATCAGGCTTTTTATGATAGTGAAAATACTGAGGACAGAAAGCGGTGGTCATCACAGCCACATTCCTCCACTGCCCAATTACAAGAATCAAAAACCTTATATAGAACATCTTCTTATCCTGACAAGCAGCCGGAGCTTACTCGGTTTTCTAGTGAACCTATTTTGGCACCAAAATCCTCATTTACATCGTATCCTCCGCCTGGTGGTAGGTCTCAACAGTCTTCCCCAAATCACAGTACAGGTCATTTGAACATTCCTTTTCATACTGGTGGAGCTCAGGTGGCTTTACCGTCACAAAATCGTTCTCATTATTTCAATTCTGCGCTACAGTTGAGTCGACCAAAACATGAGTCACATTTCTGTGGAAATGTGCACCCATTTACTACTGGCTCACCTCTAAATTATCGAATGCAGAATCCCTGGGTCAACCAATCTGGGTTGTATTCTGGAGATCATCCAAACCTCCTCAGTAATATGTTGCAGCAACAATTACACCATCAGAGTGGATCATTATCACCTCATTTATTGACCCAATTGCAGCAGCAACAACAGCATAGACATCTTCATCCCATTCAGAAACCAGGACGCTACATGTCAGGTTTCCAATCCCATTTATTTAACCCTCAGCTTTCTTCTGGATCATCCATGGTTAGCAAATATGATCATATGCTTGGTCTTGCTGATACCAGAGAACACAGGCCAAAATCAACTCATAAGGGTAAACAGAGTCATCGTTTTTTGCAACAAGGTTCTGATGCCAGTAGCCAGAAGAATGAAAGTGGTTCACTACAGTTTAGGTCAAAGTATATGACTACTGATGAAATTGAGAGTATTCTTAGAATGCAGCAAGCTGTGACTCATTGCAACGACCCCTATCATGATGACTATTATCACCAAGCTTGTCTTGCTAAAAAAGATGGGGCTAAGTTGAAACATTCATTTAGCCCAACACAACTAAAGGATGTTCCTGCACGAATCCGTGCCAATCTGGACTCCCCTGGTTTTGTTCAGGTTGATACTTTAGGGAGGGTTTCATTCCTTGCTAATCGTGGACCTCGTGCTCTTTTTGAAGTTGATCCATTAAACTCTAGTTCTGAGCGAAATATTTCAGAGAAGCCCCTTGAACAGGAGCCTCTGTTTGCAGCCAGAGTCGCAATTGAGGATGGTCTTTATCTTCTTCTTGATGTAGAGGACATTGATCGTTTTCTACAGTGTAATCAACTACAAGATGGTGGGACTCAATTAAGACGAAGACGGAAGGTTCTTATGGAAGGACTAGCATCATCTCTCCAACTCGTTGATCCACTGGGAAAGAATGGAAGCAAAGTTGGGCTTGGTGCTAAGGATGATGTAGTTTTCTTACTGTTAGTGTCTATTCCCAAAGGGCGGAAACTCTTGTCAAAGTATCTTCAGCTACTCGGTTCTGGTAGTGAGCTTATGCGGATAGTCTGCATGACCATCTTTCGTCATTTGAGATTTTTATTTGGTAGTCTACCATCCGAACCTGAAGCTGCCTTGACTACAAGTAACCTTGCTAAGGTTGTTTGTAAGTGTGTTCAGGGAATGGATCTTGGTGCCCTAGGTGCTTGTCTTGCAGCTGTAGTTTGTTCCACAGAGCAACCTCCTTTACGCCCCCTTGGAAGCACAGCTGGAGACGGTGCCTCCCTTATTTTAGTATCTGTTCTTGAGAGGGCCACTGAACTTCTTACTGATCCCCATGGTGCTTGCAGCTATATAGCTAATCGTTCATTTTGGCAGGCCTCATTTGATGAATTTTTTGGCCTTCTTACAATGTATTGCATGAATAAGTACCAGAGTATCATGCAATCACTATTTGTACAAGGGACGCCAAATGTGTCAGGAATTGGATCAGATGCTGCTAAAGCAATTAGTAGGGAAATGCCTGTTGAACTCTTGCGTGTAAGTCTTCCTCACACCAATGATAATCAGAGGAAATTATTACTAGATTTTGCTCAGCGGTCTGTGCCTGTGGTTGGAATTAACAATTATACTGGGAGCAGTGGGGGTCATGTGAACTCAGAGACTCATTGTGATATATCTGCAATCAGGCTCTCCGTGTATCATGATATATTCAGCTTGATCTGTTCCCTCGTCTTTTCTTTTTCTCATGACAGGGGAGCTTACTTTGTTACTGTGTGGCTGGTCACCATTGTGCTGGAAGTGGCTCTGGTTGCCATGAACTTAACTGGGAAAACATGTTTAAAAGTTGGTGTACTGAAGAACATAGGAACTAATGTAGAATAA 2865 0.4286 MRSYHLDFFDRNGEFVESYIKANKRIDAGGDVLGCFCFLQVGTMTLVWSLSQAEFVEGETEESDLTPNKEEPTKGRELLEALKDIKDHLLRTYSFEKELNKVVSGPRSPGVIGERGSRENSSASEWSQRDDIPYWFDQQSYDSEGQGSQDGNRWSSHPHSSLTQLYDSRPLYRTSSYPEQQRQLQHQLQHCSSEPVPNWFDQAFYDSENTEDRKRWSSQPHSSTAQLQESKTLYRTSSYPDKQPELTRFSSEPILAPKSSFTSYPPPGGRSQQSSPNHSTGHLNIPFHTGGAQVALPSQNRSHYFNSALQLSRPKHESHFCGNVHPFTTGSPLNYRMQNPWVNQSGLYSGDHPNLLSNMLQQQLHHQSGSLSPHLLTQLQQQQQHRHLHPIQKPGRYMSGFQSHLFNPQLSSGSSMVSKYDHMLGLADTREHRPKSTHKGKQSHRFLQQGSDASSQKNESGSLQFRSKYMTTDEIESILRMQQAVTHCNDPYHDDYYHQACLAKKDGAKLKHSFSPTQLKDVPARIRANLDSPGFVQVDTLGRVSFLANRGPRALFEVDPLNSSSERNISEKPLEQEPLFAARVAIEDGLYLLLDVEDIDRFLQCNQLQDGGTQLRRRRKVLMEGLASSLQLVDPLGKNGSKVGLGAKDDVVFLLLVSIPKGRKLLSKYLQLLGSGSELMRIVCMTIFRHLRFLFGSLPSEPEAALTTSNLAKVVCKCVQGMDLGALGACLAAVVCSTEQPPLRPLGSTAGDGASLILVSVLERATELLTDPHGACSYIANRSFWQASFDEFFGLLTMYCMNKYQSIMQSLFVQGTPNVSGIGSDAAKAISREMPVELLRVSLPHTNDNQRKLLLDFAQRSVPVVGINNYTGSSGGHVNSETHCDISAIRLSVYHDIFSLICSLVFSFSHDRGAYFVTVWLVTIVLEVALVAMNLTGKTCLKVGVLKNIGTNVE 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00958 954 MobiDBLite consensus disorder prediction 443 464 - -
Vimu5g00958 954 MobiDBLite consensus disorder prediction 139 161 - -
Vimu5g00958 954 MobiDBLite consensus disorder prediction 210 290 - -
Vimu5g00958 954 MobiDBLite consensus disorder prediction 253 286 - -
Vimu5g00958 954 PANTHER TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1 195 866 IPR039900 GO:0000290
Vimu5g00958 954 MobiDBLite consensus disorder prediction 219 245 - -
Vimu5g00958 954 MobiDBLite consensus disorder prediction 103 126 - -
Vimu5g00958 954 MobiDBLite consensus disorder prediction 138 161 - -
Vimu5g00958 954 MobiDBLite consensus disorder prediction 431 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00958 Vimu-Chr5 13860092 13869901 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g00958 8 103 Histidine Kinase Gene Family AT2G18790 36.607 4.01e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g00958 K12617 - gmx:100779096 1283.86