Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00925 ATGTCGGTGCTGATTGTGACGAGCTTAGGGGACCTTGTCGTCGATTTGCACACCAACAAATGCCCCTTGACCTGCAAAAATTTCTTGAAGCTTTGCAAGATTAAGTACTATAATGGGTGTTTATTTCACACTGTTCAAAAGGATTTTACAGCTCAAACTGGCGATCCAACTGGCACAGGAACTGGTGGTGATTCTGTTTACAAGTTTCTTTATGGCGATCAAGCTCGATTTTTCAGTGATGAAATTCATATTGATCTTAAGCATTCAAAAACTGGAACGGTTGCCATGGCAAGTGCTGGGGAGAATTTAAATGCTTCACAGTTCTATATCACACTGCGAGATGACCTTGACTACCTCGATGGCAAGCACACAGTAAGTATTCCAATTTCCATGCATGCTTGCTTTACTTGTTTTACCGGGTATGGATGCTTCTTTATTTTAGAACGTGGAAATATTTAA 459 0.4052 MSVLIVTSLGDLVVDLHTNKCPLTCKNFLKLCKIKYYNGCLFHTVQKDFTAQTGDPTGTGTGGDSVYKFLYGDQARFFSDEIHIDLKHSKTGTVAMASAGENLNASQFYITLRDDLDYLDGKHTVSIPISMHACFTCFTGYGCFFILERGNI 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00925 152 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-LIKE 4 1 125 IPR035542 -
Vimu5g00925 152 Gene3D - 1 126 IPR029000 -
Vimu5g00925 152 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 4 125 IPR002130 GO:0000413|GO:0003755
Vimu5g00925 152 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 42 54 IPR002130 GO:0000413|GO:0003755
Vimu5g00925 152 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 92 107 IPR002130 GO:0000413|GO:0003755
Vimu5g00925 152 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 16 31 IPR002130 GO:0000413|GO:0003755
Vimu5g00925 152 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 7 125 IPR002130 GO:0000413|GO:0003755
Vimu5g00925 152 SUPERFAMILY Cyclophilin-like 1 125 IPR029000 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g00925 7 125 U-box Gene Family AT5G67530 42.857 3.73e-26 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g00925 K12735 - gmx:100776900 248.44