Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00915 ATGGAAGAGAATTGCGGGATATCTACTTTTTCCATCACCCGCACTTATGCAAAGATTACCAATGAATTAATGCATTTGTTGGAGATGAAGACGAAGAAGAGGGTGCTCTCTGTTGAAGGTAACGTGGCGGAATCGTGGCGACGAGACGAACATGCTGCTCCGCCCAGGTGGCTAAAGAAGGCAGTGATGATGATAGTGGTGGAGAATAAAAAGCCTGTTGTTGGTGTTATGTTTGAAGGAAGGAAGGGAGCACTGCGTGCAACGTGCCTGCTTGCGTGCAACGTATTTGGAGAGATTCAAGTGAAAAAGTCTCATATGGCCCTTCGCTGCACTGAAAGACGGAGTGTGAGATTTTATAGCGTGGCCGAGCCGACCCCACTACGAAAAATGTTTGATGTGGCGTTCATAGTCGCAGGCATACAGTGTGGGTGGGCTATTCAACATTCTCTGCTCACCCCTTACGTTTGTTTGGGAATGCTTCCGCTGGAGGGGGAAGTGACGCATGCCGCAAGGAAGAACTGTGTTAAGCAAGATCGACTTCAAACTCTGAGAATCGGAGAAGAGAAGAATGAAGATGGGAGAAGAATGAAGAAAGAGAAGAATAAAGAGAGAAAATCACCATCTCCGACCGAACCCATTGACCCAACCACGCCTTCCATCACCACCCTCAGTGTGGAGGCCAGCCAGGCCGAGCCGACCCCACTCCGAAAAATGTTTGATGTGGCGTTCATAGTCGCAGGCATACAGTGTGGGTGGGCTATTCAGCATTCTCTGCTCACCCCTTACGTTCAGTTCTTACGACTTTCACACGCCGCAACCTCCTTGATCTGGCTCTGCGGCCCCGTCTCCGGACTTGTGGTGCAGCCCATTGTTGGCTACTACAGCGACAGAAGCACTTCTCGCTTCGGTCGCAGACGCCCCTTTATTCTCAGAGGTGCAGTGGCTGTCGCCATAGCTGAATTTCATATCAGTTATGCAGCCGATATAGGGTACGACGACATAACCAAAAAAACCTGTCCTTGGGCCGTTGGGGTGTTCGTCATAGGATTTGGGATCCTACATGTTGCAAACAACATGTTACAAGGTCATTGTCGTGCCTTTCTAGCTGACTTAGCGGCTGGGGACCAGAGAAAAACCAGAATAGCAAATGGGTTTTTCTCGTTCTTCATTGGTGTCGGCAATGTGTTGGGATTCACAGCGGCGTCTTTTAGTGGTCTGGACAAGACTTTTCCCTTCATGCAGACCAAGGCGTGCGATGTTTTCTGCGCCAATCTGAAAAGTTCTTACTTTTACTCGATCTTGTTACTGGTGTTCTTGGCCAGCGTAGCTCTCATCTACGTAAAGGAGAAGCCCGTGCTGCCACGGGCGGTGCAAGAGGACGCGCAGCCCTCGGCACCATCTCCGACCGAACCCATTGACCCAACCACGCCTTCCATCACCACCCTCAGTGTGGAGGCCAGCCAGGCCGAGCCGACCCCACTCCGAAAAATGTTTGATGTGGCGTTCATAGCCGCAGGCATACAGTGTGGGTGGGCTATTCAGCATTCTCTGCTCACCCCTTACGTTCAGTTCTTAGGAGTTCCACACGCCACAGCCTCCTTGATTTGGCTCTGCGGCCCCGTCTCCGAACATGTGGAGCAGCCTATTATTGGCTACTACAGCGACAGAAGCACTTCTCGCTTCGGTCGCAGACGCCCCTTTATTCTCAGAGGTGCAGTGGTTGTCGCCATAGCTGAATTTCTTATCAGTTATGCAGTCGATATAGGGTATGACGACATAACCAAAAAAACCCGTCCTTGGGCTGTTGGGGTGTTCGTCATAGGATTTGGGATCCTACATGTTGCAAACAATATGTTACAAGGTCCTTGTCGTGCCTTTCTGGCTGACTTAGTGGCTGGGGACCAAAGAAAAACCAGAATAGCAAATGGGTTTTTCTCGTTCTTCATTGGTGTCGGCAACGTGTTGGGATTCGCAGCGGCGTCTTTTAGTGGTCTGGACAAGACTTTTCCCTTCACGCAGACCAAGTTCTTACTTCTTCTCGATCTTGTTACTGGTGTTCTTAGCCACCGTAGCTCTCATCTACGTAAAGGACAAGCCCGTGCCGCCACGGGCGGTGCAAGAGGACGCGCAACCCTTGGGTTTCTTTCAGCTTGA 2154 0.5074 MEENCGISTFSITRTYAKITNELMHLLEMKTKKRVLSVEGNVAESWRRDEHAAPPRWLKKAVMMIVVENKKPVVGVMFEGRKGALRATCLLACNVFGEIQVKKSHMALRCTERRSVRFYSVAEPTPLRKMFDVAFIVAGIQCGWAIQHSLLTPYVCLGMLPLEGEVTHAARKNCVKQDRLQTLRIGEEKNEDGRRMKKEKNKERKSPSPTEPIDPTTPSITTLSVEASQAEPTPLRKMFDVAFIVAGIQCGWAIQHSLLTPYVQFLRLSHAATSLIWLCGPVSGLVVQPIVGYYSDRSTSRFGRRRPFILRGAVAVAIAEFHISYAADIGYDDITKKTCPWAVGVFVIGFGILHVANNMLQGHCRAFLADLAAGDQRKTRIANGFFSFFIGVGNVLGFTAASFSGLDKTFPFMQTKACDVFCANLKSSYFYSILLLVFLASVALIYVKEKPVLPRAVQEDAQPSAPSPTEPIDPTTPSITTLSVEASQAEPTPLRKMFDVAFIAAGIQCGWAIQHSLLTPYVQFLGVPHATASLIWLCGPVSEHVEQPIIGYYSDRSTSRFGRRRPFILRGAVVVAIAEFLISYAVDIGYDDITKKTRPWAVGVFVIGFGILHVANNMLQGPCRAFLADLVAGDQRKTRIANGFFSFFIGVGNVLGFAAASFSGLDKTFPFTQTKFLLLLDLVTGVLSHRSSHLRKGQARAATGGARGRATLGFLSA 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00915 717 MobiDBLite consensus disorder prediction 185 209 - -
Vimu5g00915 717 MobiDBLite consensus disorder prediction 457 477 - -
Vimu5g00915 717 MobiDBLite consensus disorder prediction 185 219 - -
Vimu5g00915 717 PANTHER SUGAR TRANSPORTER 235 467 - -
Vimu5g00915 717 Pfam MFS/sugar transport protein 247 452 - -
Vimu5g00915 717 Pfam MFS/sugar transport protein 502 658 - -
Vimu5g00915 717 SUPERFAMILY MFS general substrate transporter 233 661 IPR036259 -
Vimu5g00915 717 Gene3D MFS general substrate transporter like domains 236 452 IPR036259 -
Vimu5g00915 717 Gene3D MFS general substrate transporter like domains 495 691 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00915 Vimu-Chr5 12834632 12839212 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g00915 490 675 Sucrose Transporter Gene Family AT1G71880 64.021 6.38e-78 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g00915 K15378 - gmx:100786411 374.785