Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00885 ATGGAGATTCCAAACTTTCTCAGAGTTCACAAAGATGGCACCATCGAACGCCTCCAAGGCTCTCCCTTTGTGCCACCCAAGCTTCTAGATCCAATAACAAATCTATCATCCAAAGACGTTGTCATCTCAGATAAACCTCCCATCTCTGCTCGTCTATACCTTCCAAACGGAATCCTGTCCCAGGAGGACAATCTCAGTAACAACCTCAAACTCCCCATCTTGGTCTACTTTCACGGTGGAGGATTTTTCTTCGAATCCGCCTTCAGCCAACTTCACCAGAACTATTTCAACGCGTTTCTCTCCGTCGCAGACATTTTAGTCGTTGTTGTGGAGTACAGGTTGGCACCGGAGACTCCTCTTCCTGCGGCTTATCATGAATGCTGGGAAGCTCTAAAATGGGTGGCTACCAAGGCTGATCCGTGGGTTCTCAAACACGGCGATTTCGACAGAGTGTTCGTTGGAGGTGACAGTGCTGGCGCTAACATAGCGCATAACATTGCCATACGAGCTGGGGCCGAAGCATTACCTGGTGGTGTAACAGTTTTAGGTGCTGTGGTTTCTCATCCCTTCTTCTTGGGATCAAAGAAAATCGGGAGTGAAACGGAAGAGAGCTTGTCCGTTAGGGTTTGGGAATTTATTCAGCCATGTGACGGCGGTGGGTTTGACAACTCGTTGATAAATCCGCTGAGTGAAATAGTGAAATAG 705 0.4809 MEIPNFLRVHKDGTIERLQGSPFVPPKLLDPITNLSSKDVVISDKPPISARLYLPNGILSQEDNLSNNLKLPILVYFHGGGFFFESAFSQLHQNYFNAFLSVADILVVVVEYRLAPETPLPAAYHECWEALKWVATKADPWVLKHGDFDRVFVGGDSAGANIAHNIAIRAGAEALPGGVTVLGAVVSHPFFLGSKKIGSETEESLSVRVWEFIQPCDGGGFDNSLINPLSEIVK 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00885 234 PANTHER ARYLACETAMIDE DEACETYLASE 3 228 - -
Vimu5g00885 234 Gene3D alpha/beta hydrolase 6 233 IPR029058 -
Vimu5g00885 234 Pfam alpha/beta hydrolase fold 74 194 IPR013094 GO:0016787
Vimu5g00885 234 SUPERFAMILY alpha/beta-Hydrolases 6 203 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00885 Vimu-Chr5 11816609 11817313 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g00885 6 213 Carbohydrate Esterase AT1G49640 42.723 5.88e-56 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g00885 - - gmx:100813532 316.235