Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00841 ATGGCCAATGCAAACATCAATAATGGTGGTTTAGTTGAAAGTAGTCCAGAGATCGTGACCGTTCAATTGAAGATTCAGAGCTATTGGGTCCAAAAAGACAATTGTTGCCTGAGCAGAAGCGACCGTTCACCGAACCGTCGTTGTTCACTGGAGTGTTGTCCGTCGTCGCTCTGCTGTTTCGAAGTATCAATGAACGCTGAAACCACTATTGACGTGGTTTTTGAAGGTTCCGCCGTTCCTTTGGCCAATCTTTGTTATTGTTTGAGTTTATTTAGCGTTGCTAAGGTCATCGGAGGTACCCCTAACAAGCTCTTCAAGATAAAAGTGGTGAGGTTGTCGATTGCCCAGGTTTTGACTGTGATTTCTCATAAGCAAAAGGCTGCGTTGATGGATGCCTACAAGAACAAAAAGTACTTTCCCCTTGATCTCCGCCCCAAGAAGACTAGGGCTATTCGCAAGAGGCTTACTAAGCACCAGGTGAAATGTGGAAGAATCCCTTCCTATGTTGTTCGAGAGTGGGGCCTCAAGGTCGTCGACGGTGGAAACGGCACGACTGACGCTGGAAGAGACGCGAAGAATGACCGGCGGCGCCGCCTCTTGGTGGACCTCCGGTGGCCGTTGAATGGCGAACGACAGTGGAGTCGTCAAGGGGGTTTGGTCGTTGATCGGTGGCGGAGCTTTGATCGGTGGCCGTTGCACGGAACGCCGGCGAAAGGACACGGCAGCAAGGGCGGCCCGTCACGGAAGAATAACCGGCGTGATGAGCCGCCAAGGTGGTCGGTGGGAAGACTCGAGAAGATGATCGTCGGCGTCGCTGTGGGTGGACCTCCGGTGGGTGGTGGCAAGGGGGACGACTGA 858 0.528 MANANINNGGLVESSPEIVTVQLKIQSYWVQKDNCCLSRSDRSPNRRCSLECCPSSLCCFEVSMNAETTIDVVFEGSAVPLANLCYCLSLFSVAKVIGGTPNKLFKIKVVRLSIAQVLTVISHKQKAALMDAYKNKKYFPLDLRPKKTRAIRKRLTKHQVKCGRIPSYVVREWGLKVVDGGNGTTDAGRDAKNDRRRRLLVDLRWPLNGERQWSRQGGLVVDRWRSFDRWPLHGTPAKGHGSKGGPSRKNNRRDEPPRWSVGRLEKMIVGVAVGGPPVGGGKGDD 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00841 285 Gene3D - 80 137 IPR036049 GO:0003735|GO:0005840|GO:0006412
Vimu5g00841 285 Gene3D - 138 204 - -
Vimu5g00841 285 MobiDBLite consensus disorder prediction 247 261 - -
Vimu5g00841 285 MobiDBLite consensus disorder prediction 231 261 - -
Vimu5g00841 285 PANTHER 60S RIBOSOMAL PROTEIN L35 81 161 IPR045059 GO:0000463|GO:0022625
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00841 Vimu-Chr5 10895785 10902048 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g00841 88 177 Cytoplasmic Ribosomal Protein Gene Family AT2G39390 65.625 5.88e-33 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g00841 K02918 - vvi:100265729 121.709