Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00794 AGCTCTATGTATACATTGGAGCTCTATCGTTTCTTTGGTTTCCAATCCTCGCACACTTCCGAAAAACGCTTCTATATTTACGTTCGGTTGATTGCGTTGAGTTGCAATTGCAGCTTTTTACTAAGCAGGAGTTCAGGAACTATAATGGCTTATGTTGGAATAGAACTAAGCTCGCCGACACTTGCATCAGCCCTTATTAACCTCCTCCCAGCTTTCACTTTTATACTTGCTCTCATTTTCAGGATGGAAGAAGCTTCGGTGGCAAAGAAATACCCTGCTATAACAGTGATTATATTCTTCCAACTCTTATCTTCAACCATGCAGTGTGGAGTATTTGCCTTAATTGTTGTGAGGGATCCAACTGAATGGAAGCTCAACTTGGATATAGGGCTGATTGGCGTCTTATTCAGGTGGAAAATGAAAACCAACCACATGAAACTGAAACACTGA 450 0.4111 SSMYTLELYRFFGFQSSHTSEKRFYIYVRLIALSCNCSFLLSRSSGTIMAYVGIELSSPTLASALINLLPAFTFILALIFRMEEASVAKKYPAITVIIFFQLLSSTMQCGVFALIVVRDPTEWKLNLDIGLIGVLFRWKMKTNHMKLKH 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00794 149 PANTHER WAT1-RELATED PROTEIN 39 85 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00794 Vimu-Chr5 10163007 10164394 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g00794 47 86 Nodulin-like Gene Family AT3G28050 67.500 4.43e-11 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g00794 - - vra:106767433 104.76