Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00786 ATGGTGTGCATAAGGAAGGCGACGGTGAAGGATCTTCTGGCGATGCAGGCTTGCAACCTGTTCTGCCTACCCGAGAACTACCAGATGAAGTACTATCTCTACCATATCCTCTCCTGGCCTCAGCTCCTTTACGTCGCCGAAGACTACAACGGTCGCATCGTCGGCTACGTCCTCGCCAAGATGGAGGAAGAGACCACCGACTGCCACGGCCACATCACCTCCCTCGCCGTCCTCCGCACCCACCGCAAACTCGGTCTCGCCACCAAACTCATGACCGCCGCCCAGAACGCCATGGAACAGGTGTTTGGTGCCGAGTATGTGTCCCTGCACGTGCGCAAGAGCAACCGTGCGGCCTTCAATTTGTACACCGAGACCTTGGGGTACAAGATTCATGATGTGGAGGCTAAGTATTATGCGGACGGAGAAGATGCTTATGACATGAGGAAGGAGCTTAAAGGGAAGCAGCACCACCACCATCATCATCACCACCATCACCACCACCACCATGAGCATGGTGGTGGGTGTTGTGGTGGGGAGGTCAAGGGAAATGCTAAAGCCAACTGA 564 0.555 MVCIRKATVKDLLAMQACNLFCLPENYQMKYYLYHILSWPQLLYVAEDYNGRIVGYVLAKMEEETTDCHGHITSLAVLRTHRKLGLATKLMTAAQNAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAKYYADGEDAYDMRKELKGKQHHHHHHHHHHHHHHEHGGGCCGGEVKGNAKAN 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00786 187 PANTHER N-TERMINAL ACETYLTRANSFERASE 1 171 IPR045047 GO:0004596|GO:0006474|GO:0031415
Vimu5g00786 187 MobiDBLite consensus disorder prediction 152 187 - -
Vimu5g00786 187 MobiDBLite consensus disorder prediction 152 171 - -
Vimu5g00786 187 CDD NAT_SF 43 110 - -
Vimu5g00786 187 Gene3D - 2 175 - -
Vimu5g00786 187 Pfam Acetyltransferase (GNAT) family 39 128 IPR000182 GO:0016747
Vimu5g00786 187 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1 151 IPR016181 -
Vimu5g00786 187 FunFam N-alpha-acetyltransferase daf-31-like 2 175 - -
Vimu5g00786 187 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 2 152 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00786 Vimu-Chr5 10025485 10028673 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vimu5g00786 Acetyltransf_1 8.7e-16 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g00786 K20791 - gmx:100800073 326.635