Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00763 ATGGTCATTTTATATTATTTGTTTGCAGGGTATATATCAGAAACAATGAAGATGGGAGCGAGCCTTCCTCCTTATAGGACCTTTGCTTTGGATGAACTTAAGGAAGCTACAAATAATTTTGATTCATCCTGTTTCATAAGTGAAGGCCCACATGGTCAGATTTATAAAGGGGTTCTCTCTGATGGAATGCACATTTCTATTAGAGGTTTGAAAATGAGGAAGAGACATAGCCCTCAAACTTACATGCACCATGTTGAGATGATTTCAAAACTAAGGCATTCACACTTGGTTAGTGCTCTTGGGCATGCTTTTGAGTGCAACCAGGATGATTCGTGTGTGAACAGTGTATTTCTCATATTTGAGTTTGTTCCAAACAGAAGTTTACGAAGCTGCGTTTCTGGATCTTCTGGGGAAAAGATTTCTTGGACTCAGAGAATAGCAGCTACAATTGGAGTGGTGAAGGGCATTCAATTTTTGCACACAGGGATAGTGCCTGGACTATATTCAAATAATCTCAAGATTACAGATATTGTTTTGGATAACAATCTCAATGTTAAAATAAGCAGCTACAATCTGCCACTCTCTTCTGAAAATAAAAGAATGATCAGCAATGGAACATACCCTGGACTCAAAGGAAATGTCCAAGCAAGGATAAAGGGTGAAGACAAGAATGATGTCTATGATATTGGGGTAATCTTGCTAGAAATCATTCTGGGCCGACCAATAATGTTTCACAATGAAGTTGGAACACTAAAAGATCTTTTACATGTAAGCATTAAAACTGATGACATAGCTAGAAGAAGTATTGTTGACCCAGCAGTTCACAAGGAATGCTCAGATGAATCATTAATGACAATGATGGAGATATGTGTAAGGTGTCTCTCAGATGACCTAACTGAAAGGCCTTCTGTGGAAGATATTCTCTGGAACTTGCAGTTTGCAGCACAAGTTCAGAATTCATGGAAAAGAGACTCAAGTGATCACAGTTACTCTCCTGCACCATCCTCCAGGGACACATAG 1020 0.3892 MVILYYLFAGYISETMKMGASLPPYRTFALDELKEATNNFDSSCFISEGPHGQIYKGVLSDGMHISIRGLKMRKRHSPQTYMHHVEMISKLRHSHLVSALGHAFECNQDDSCVNSVFLIFEFVPNRSLRSCVSGSSGEKISWTQRIAATIGVVKGIQFLHTGIVPGLYSNNLKITDIVLDNNLNVKISSYNLPLSSENKRMISNGTYPGLKGNVQARIKGEDKNDVYDIGVILLEIILGRPIMFHNEVGTLKDLLHVSIKTDDIARRSIVDPAVHKECSDESLMTMMEICVRCLSDDLTERPSVEDILWNLQFAAQVQNSWKRDSSDHSYSPAPSSRDT 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00763 339 Gene3D Phosphorylase Kinase; domain 1 11 122 - -
Vimu5g00763 339 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 14 122 - -
Vimu5g00763 339 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 123 327 - -
Vimu5g00763 339 SUPERFAMILY Protein kinase-like (PK-like) 18 313 IPR011009 -
Vimu5g00763 339 Gene3D Transferase(Phosphotransferase) domain 1 123 332 - -
Vimu5g00763 339 ProSiteProfiles Protein kinase domain profile. 40 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu5g00763 339 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 16 325 - -
Vimu5g00763 339 Pfam Protein kinase domain 46 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00763 Vimu-Chr5 9455606 9460910 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g00763 9 336 Miscellaneous Gene Families AT3G03770 58.859 5.21e-132 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Vimu5g00763 Pkinase 2.2e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g00763 - - gmx:100797327 602.438