Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00732 ATGTCTAACAGAAACGAATATTCTTCTTTACCCGTTAGCTCCTATTTAGAATTGCAACGTCAGAACGAGTCCTCAAAATCTGTAGGCATTCCTTCTTATGACGAATCCGAAGTGTATTTGGGATCCAAAATCGAAGACGAGGATGAAGATTTCGAAACGGACATCGATAATTACCCCCTTGTGATTGTGGGGTCCAATAAAGGCTCTGGGATACCTGGGGCTGTTTTCAATTTAACAACTACAGTTATTGGGGCAGGGATCATGGCTCTCCCTGCCACTATGAAAGTTCTAGGATTGGTTTTGGGGATTATTTTGATAATTCTTATGGGAATTTTGTCTGAAATTAGCGTGGAACTGTTGGTGAGGTTTTCTGTTTTGTGTAAGGAATCGTCCTATGGGGAGGTTGTTCAGCATGCAATGGGAAAACCTGTGAGGATTTTGTCTGAAATCTGCATTATTTTGAACAATGCCGGTGTTTTGGTGGTTTACTTGATAATCATGGGGGATGTTATGTCTGGATCCTCTCACCATATGGGGGTTTTTGATCAGTTAATGGGGAATGGGGCGTGGGATCAAAGGAAGATTGTGGTTTTAGTTGTCATGGTGGTTTTCCTTGCTCCCCTTTGTTCACTTGACAAGATTGATTCATTGAGCTTGACCTCGGCTGCCTCCGTGGCTCTTGCTGTTTTGTTTGTCGTTGTTGCTTTTACAGTTGCTTTCATCAAGCTCGTGGAAGGACGGATTGATTCTCCCAGATTGGCTCCTGATCTTAGCTCCAAAACTGCAATTTTGGATTTTCTTGTTGCGATACCCATCATGACCAATGCATATGTTTGCCAGTTTAATGTGCCGCCAATATATAATGAGCTTGAACAACGGTCTCCTCAGAAAATGAACATGGTTGGCAGGTACACCACAATTTTGTGCATCCTAGTTTATGCTTCCACTTCCATATCGGGTTACCTGCTCTTTGGGAAAGACACAGAGGCTGATGTACTGACTAATTTTGATAAGGATCTTGGAATTCGGTATAGCTCGGTCTTGAACTATATTGTCCGGATTGGCTACATTCTTCATTTGATACTTGTTTTCCCTGTTATTCATTTTTCACTGCGCCAAACAGTGGACGCATTATTGTTTGAGGGATCACCTCCTCTTTCAGAAAGTAAGAAGAGATCTTTGGGGTTGACTGCGGTTCTGTTGGTCCTCATATATATTGGGTCTACCATGATTCCAAACATCTGGACAGCTTTTAAGTTCACTGGGGCAACCACGGCTGTTTCATTGGGTTTTATATTTCCTTCTCTTATTTCATTGAGACTAAGACATCTGGGAGATCTAAGCTACGGGGAATGGGTTTTGTCATGGTTGATGTTGGTATTAGCTGTGACTGTTAGCATAGTAGGAGTTGTTAGTAATGTTTATAGCCTTGAGAGTAAGTCTTAG 1446 0.4198 MSNRNEYSSLPVSSYLELQRQNESSKSVGIPSYDESEVYLGSKIEDEDEDFETDIDNYPLVIVGSNKGSGIPGAVFNLTTTVIGAGIMALPATMKVLGLVLGIILIILMGILSEISVELLVRFSVLCKESSYGEVVQHAMGKPVRILSEICIILNNAGVLVVYLIIMGDVMSGSSHHMGVFDQLMGNGAWDQRKIVVLVVMVVFLAPLCSLDKIDSLSLTSAASVALAVLFVVVAFTVAFIKLVEGRIDSPRLAPDLSSKTAILDFLVAIPIMTNAYVCQFNVPPIYNELEQRSPQKMNMVGRYTTILCILVYASTSISGYLLFGKDTEADVLTNFDKDLGIRYSSVLNYIVRIGYILHLILVFPVIHFSLRQTVDALLFEGSPPLSESKKRSLGLTAVLLVLIYIGSTMIPNIWTAFKFTGATTAVSLGFIFPSLISLRLRHLGDLSYGEWVLSWLMLVLAVTVSIVGVVSNVYSLESKS 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00732 481 PANTHER AMINO ACID TRANSPORTER 66 465 - -
Vimu5g00732 481 Pfam Transmembrane amino acid transporter protein 69 470 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00732 Vimu-Chr5 8820990 8822435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g00732 5 481 Amino Acid or Auxin Permease AAAP Family AT1G80510 71.458 0.0 648
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g00732 - - var:108333183 766.918