Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00717 ATGATTGAGAAGTGCAAGGGAGTGTTGGAAGGATTAGAGTCTTTGGTTGATGTTGGGGGAGGGACAGGAACCATGGTTAAGGCCATTGCCAAGTCTTTTCCACACTTGAAGTGCACTGTTTTTGATCTCCCACATGTTGTTCATGGCTTGCAGGGAACAGATAACATAGAATATGTTGGAGGGGACATGTTTCAAGCAATACCTTCTGCTGATTCCATCGTGCTTAAGACTATAATGCATAACTGGAACGATGAGGAATGCTTGAAAATCCTGAAGAGATGTAAGGAGGCAATCGGAAAAAGAGAAAAAGGAAAAGTGATTATCATAGACGTGGTGATAGGAAACCTGAAAGGAGACATTGTATTGGATCAAACAAAGCTCTACTATGATATGGAGATGATGGTGTTGGTTACTGGAAAAGAGAGAAATGAGAAAGATTGGGTTAAGTTGTTTTTTTCTGCTGGCTTTAATCACTATAAGATAACTCCAGTTCTAGGTTTTAAGTCTCTCATAGAGGTTTATCCATAG 528 0.3996 MIEKCKGVLEGLESLVDVGGGTGTMVKAIAKSFPHLKCTVFDLPHVVHGLQGTDNIEYVGGDMFQAIPSADSIVLKTIMHNWNDEECLKILKRCKEAIGKREKGKVIIIDVVIGNLKGDIVLDQTKLYYDMEMMVLVTGKERNEKDWVKLFFSAGFNHYKITPVLGFKSLIEVYP 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00717 175 PANTHER O-METHYLTRANSFERASE 2 160 IPR016461 GO:0008168
Vimu5g00717 175 Gene3D Vaccinia Virus protein VP39 1 175 IPR029063 -
Vimu5g00717 175 FunFam O-methyltransferase ZRP4 1 175 - -
Vimu5g00717 175 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 175 IPR016461 GO:0008168
Vimu5g00717 175 Pfam O-methyltransferase domain 5 157 IPR001077 GO:0008171
Vimu5g00717 175 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 9 174 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00717 Vimu-Chr5 8687930 8688565 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g00717 9 175 Monolignol Biosynthesis Gene Families AT1G51990 39.766 3.88e-34 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g00717 - K16040 gmx:100793263 305.449