Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00712 ATGTTAGAACTACCATTGAAGATGGCTCTTCGGTTCCCCAATTTGGATTTGAAGTCTTTGCCCTTTGCAGAGAACCTCAACCCTGAACTTCTTGGTGGCGTTGTTGCTCTTCTTGCTCTTGGCTTCACTGCTGCTTATATTAGCTATCGCACCAAAGGATGTTTGGATCCCAAAAATTTCAAAGAATTTAAACTGATAAAGAAGACACAGCTGAGCCACAACTCTGCAAGATTCAGATTTGCCCTTCCTACTCCTTCTTCAAGATTAGGTCTTCCTGTTGGAAAAAACATACTTGCTAGAGGAAGAGATAGCCAAGGAGAAGAAGTTCTGAGATCATATACTCCAATCACGTTGGATTCAGATGTTGGCTACTTCGAGTTGGTTGTCAAGATGTACCCAAATGGAAAGATGTCCCACCATTTTAGACAAATGAAGGAAGGTGATTATTTGGCTGTGAGGGGTCCAAAGGGACGTTTCAGTTACAAACCTGGCCAAGTTAGGGCATTCGGAATGCTTGCAGGAGGCTCAGGCATAACTCCTATGTTTCAGCTCATAAGAGCCATTCTAGAAAACCCTAAAGACAAAACAAAGGTGCACCTCATTTATGCCAGTGTAACAGTGGATGACATTCTATTGAAGGAAGAACTAGATAATTTTGCCGAGAAATTTCCTCAAAGATTTGAAGTATATCATGTTCTTAATAAGCCTCCTCAACAATGGAATGGTGGCATTGGGTTTGTATCGAAGGAGATTATTAAATCACATTGCCCTGAACCAGCAAAAGATATTCAGATACTAAGGTGTGGTCCACCAGCAATGAACACAGCCATGGCTACTCACCTTGATGCACTTGGCTACACATCAGACATGCAGTTCCAATTCTAA 885 0.4181 MLELPLKMALRFPNLDLKSLPFAENLNPELLGGVVALLALGFTAAYISYRTKGCLDPKNFKEFKLIKKTQLSHNSARFRFALPTPSSRLGLPVGKNILARGRDSQGEEVLRSYTPITLDSDVGYFELVVKMYPNGKMSHHFRQMKEGDYLAVRGPKGRFSYKPGQVRAFGMLAGGSGITPMFQLIRAILENPKDKTKVHLIYASVTVDDILLKEELDNFAEKFPQRFEVYHVLNKPPQQWNGGIGFVSKEIIKSHCPEPAKDIQILRCGPPAMNTAMATHLDALGYTSDMQFQF 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00712 294 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 170 189 IPR001709 GO:0016491
Vimu5g00712 294 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 264 272 IPR001709 GO:0016491
Vimu5g00712 294 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 208 219 IPR001709 GO:0016491
Vimu5g00712 294 SUPERFAMILY Riboflavin synthase domain-like 54 163 IPR017938 -
Vimu5g00712 294 CDD cyt_b5_reduct_like 63 294 - -
Vimu5g00712 294 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 150 289 IPR039261 -
Vimu5g00712 294 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 58 162 IPR017927 GO:0016491
Vimu5g00712 294 PRINTS Cytochrome B5 reductase signature 147 161 - -
Vimu5g00712 294 PRINTS Cytochrome B5 reductase signature 264 272 - -
Vimu5g00712 294 PRINTS Cytochrome B5 reductase signature 111 118 - -
Vimu5g00712 294 PRINTS Cytochrome B5 reductase signature 208 219 - -
Vimu5g00712 294 PRINTS Cytochrome B5 reductase signature 170 189 - -
Vimu5g00712 294 PRINTS Cytochrome B5 reductase signature 89 100 - -
Vimu5g00712 294 PANTHER NADH-CYTOCHROME B5 REDUCTASE 50 294 IPR001834 GO:0016491
Vimu5g00712 294 Gene3D Translation factors 53 151 - -
Vimu5g00712 294 Pfam Oxidoreductase NAD-binding domain 171 277 IPR001433 GO:0016491
Vimu5g00712 294 Pfam Oxidoreductase FAD-binding domain 63 161 IPR008333 -
Vimu5g00712 294 Gene3D - 152 294 IPR039261 -
Vimu5g00712 294 FunFam NADH-cytochrome b5 reductase 53 152 - -
Vimu5g00712 294 FunFam NADH-cytochrome b5 reductase 152 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00712 Vimu-Chr5 8583200 8591064 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g00712 48 294 NADPH P450 reductases AT5G17770 69.231 1.86e-135 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g00712 K00326 - gmx:100809584 533.102