Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00703 ATGGCAGACATGGTTATAATTATTATGGTGCTTATGAACGAGGAATGGGTGGAAGAGGTGGTTATGCAGATGAGAAGTCCTATGGTAGGTTTGGACCACGTTCTGCTGGGGGGTATCAGAATGGGATTTCTGATGTGGAATCCAATCGTGGTTATGGAGACATGCCAAGCCAAAGACAATCATGTTAACATTAAGATATTTGTGAGTCATATCAGGGAGGGGCTGATGTCCTATAAGCAGTTCATTCAGGAGCTTGAGGATGATATACTACCAGCTGAAGCAGAGCGTAGGTTGAAGGATAAATATCATCCAACAAATTTGCTTACAGTCATTGAAAGGAGGAATGAAAATGCTCGACAGCTAGCAAAGGAATTTTTTCTTGATTTACAGAGTGGAACATTAGAACTAAATCCTGGTTTGGAGGCCTCTGTATCCAACAAATCAGGGCAAGCTAGTGAGCCAAATTCAGAGGAGGAAGCAGATACTGGAGGCAAACGAAGAAGGCATGGAAGGGGACCTAATAAAGAAAATGATTTCTCAGCTGCTCCAAAGGCTCACCCAATCAGTTCTGAACCAAGAAGGATACAAGCAGATGTTCAACAGGCTCAGGTCCTTGTCCGTAAGCTTGATGCTGAAAAAGGGATTGAAGATAATATTTTGTGCAGCAGCAGCGATCATAATAAAAATGATGACAAGGCACACAGTGGATCTGTGGGCCCCATAGTAATTATTCGAGGCCTAACATCTGTTAAGGGTTTAGAAGGTGTCGAGCTTCTGGATACACTTATAACTTACCTTTGGCGGATTCATGGTGTGGATTATTATGGCATGATTGAGACTAATGAGGCTAAGGGCTTTAGGCATGTGAGACCGGAAGGGACGGGGCATGAAGAAACAGGTAAATCAGGGTCGGACTGGGAGAAGAAGCTTGATTTATTTTGGCAAGGAAGGCTGAATGGTTTGGATCCCTTGGAAATAATGACTGCTAAGGAGAAGATAGATGCTGCAGCAATGGAAGTATTGGATCCATATGTTAGAAAAATTAGGGATGAAAAGTATGGATGGAAGTATGGATGTGGAGCTAAGGGCTGCACAAAGCTTTTTCATGCTGCTGAGTTTGTGCACAAACATCTGAAGCTCAAACACCCAGAGCTTGTTCTGGAACAGACTACCAAAGTACGAGAGGATCTCTACTTTCAAAATTACATGAATGATCCAGATGCTCCTGGCGGGACACCCATAATGCAGCAATCTCAGCGCGAAGCAACCCCTGCAGCCCTATGGCAATCGTTGCATAGCACCTGGCTCTGTCAGACATTGTGGTGCCATTCATGGAATATCGCAGTGGCTTGCGGGCTTCCCAGCCCTCCATTTAAGGACAGACCCTTAAAGCGAAGATTAGGTATTGAGGGTCGATTAAGAGATGATCGTGGTAATAGACGAGACCATGATCGGAATGACAGAATGAATGGAGATAGGCCTGATAATTCCCCATCCAGTGAAAGACAGTCACTTGAGATGGGAAACCGTGATGAAGCAATGTATGATTCTTATGCAGGGCCAGCCATACCTCCATTTGCCTCAGATATACCTCCTCCACCAGTGTTGATGCCTGTACCTGGTGCTGGGCCTTTGGGACCCTTCGTTCCTGCTCCTCCAGAAGTTGCAATGCAGATGTTAAGAGATCAAGGAGGACCAACATCATATGATGCCTCTGGAAGAAAGATGCGGGGTGGCCCTCATTTGGGTGGTGCAGCACCAATTATTGCTGTTCCTCCCAACTTTAGACCAGATCCTCGGCGGATGCGAAGTTATCAAGATCTGGATGCCCCAGAGGACGAGGTTACTGTTATAGACTATCGGAGTTTGTAG 1872 0.4541 MADMVIIIMVLMNEEWVEEVVMQMRSPMVGLDHVLLGGIRMGFLMWNPIVVMETCQAKDNHVNIKIFVSHIREGLMSYKQFIQELEDDILPAEAERRLKDKYHPTNLLTVIERRNENARQLAKEFFLDLQSGTLELNPGLEASVSNKSGQASEPNSEEEADTGGKRRRHGRGPNKENDFSAAPKAHPISSEPRRIQADVQQAQVLVRKLDAEKGIEDNILCSSSDHNKNDDKAHSGSVGPIVIIRGLTSVKGLEGVELLDTLITYLWRIHGVDYYGMIETNEAKGFRHVRPEGTGHEETGKSGSDWEKKLDLFWQGRLNGLDPLEIMTAKEKIDAAAMEVLDPYVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPELVLEQTTKVREDLYFQNYMNDPDAPGGTPIMQQSQREATPAALWQSLHSTWLCQTLWCHSWNIAVACGLPSPPFKDRPLKRRLGIEGRLRDDRGNRRDHDRNDRMNGDRPDNSPSSERQSLEMGNRDEAMYDSYAGPAIPPFASDIPPPPVLMPVPGAGPLGPFVPAPPEVAMQMLRDQGGPTSYDASGRKMRGGPHLGGAAPIIAVPPNFRPDPRRMRSYQDLDAPEDEVTVIDYRSL 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00703 623 MobiDBLite consensus disorder prediction 469 495 - -
Vimu5g00703 623 MobiDBLite consensus disorder prediction 139 157 - -
Vimu5g00703 623 Pfam Arsenite-resistance protein 2 299 422 IPR007042 -
Vimu5g00703 623 MobiDBLite consensus disorder prediction 139 195 - -
Vimu5g00703 623 PANTHER ARSENITE-RESISTANCE PROTEIN 2 96 621 IPR039727 GO:0006397
Vimu5g00703 623 MobiDBLite consensus disorder prediction 561 597 - -
Vimu5g00703 623 MobiDBLite consensus disorder prediction 158 175 - -
Vimu5g00703 623 ProSitePatterns Zinc finger C2H2 type domain signature. 359 382 IPR013087 -
Vimu5g00703 623 MobiDBLite consensus disorder prediction 469 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00703 Vimu-Chr5 8418326 8423793 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g00703 72 623 C2H2 Transcription Factor Family AT2G27100 59.622 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g00703 K27103 - gmx:100817569 845.499