Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00644 ATGGAGAACAGTGCAGAGAATATTACCATGAATGGTGAAAGCAATGATGAATTTATTAACGTAGTTGATAGTGTGTCTGACTTGGTTCCTACGGTCAACATGTGTTTCGACAGTATGGAAGATGCAAAGAAATATTATTCAGATTACGGAAAAAGAATTGGATTTGGTGTTCGTACAAGAACTTCAAAAAAGGACAACAATAACGAATTGTATTATTTGAGATTGGTATGTTCAAGGGAAGGTAGATATGTCTCTAACATTCGTCCTAAAGTAAAAACCCTTCCTAGTCAAACAAAGCAATGCCCTGCGGGGATAACATTTGCCAAAAAAGATGACAAATGGGTTGTGAGGACTGTTATGGTAGATCACAGTCATGATCTTTGTCCACAAACTTCCAATCTCATTCGTGCCAACAGAAAATTGGAC 426 0.3732 MENSAENITMNGESNDEFINVVDSVSDLVPTVNMCFDSMEDAKKYYSDYGKRIGFGVRTRTSKKDNNNELYYLRLVCSREGRYVSNIRPKVKTLPSQTKQCPAGITFAKKDDKWVVRTVMVDHSHDLCPQTSNLIRANRKLD 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00644 142 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 7 140 - -
Vimu5g00644 142 Pfam FAR1 DNA-binding domain 44 128 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00644 Vimu-Chr5 7594547 7595417 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vimu5g00644 FAR1 1e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g00644 - - vra:106766675 227.254