Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00552 TTGAAGAAACGGAAGGAAGATAAATTGGAACAAGCTAAGGTGCAATTCACCCCTGAAAAATTAGATGAGTCGTCGGAGGAAAAGCAAGACGAAACTCTTGAAGAGTCAAACAGCATTCCTAATGAAGGTTTGGTAGTGCTAGAAACAACAGTTCCCACCAGGTTGATGGAAGATATTGCTGCTACACGGATTCAAAATGCATTTCGTGCATTTCTGGCAAGAAGAACGTTGCACAATATAAGAGATACTGCACTAAACTACACGATAAACATTGCACCATCGAAGGTAGAATTGAAACTTGAGGCTGCCAAAGAACAGGCAGTAACTACACTGAACTATATACATACTTGGAGCAGAATACAGGAACAGATTAAAGCTCGCAGACTCTATATGCTAACAGAAGCAAGGATTAAACAAAAGAAATTAGAAAACCAGTTAAAACTTGCAGCTAAGATTCATCAGATTCAGGTGGGATGGTGTGGAGGTTCCGACACAATGGAAGAGATACTTTTCAGGATACATCAGAGAGAAGAAGCAGCAGTCAAACGAGAGCGAGCTATGGCATATGCCTTCTCTCATCAGAGCATATTTCAGTGGAGGCCCAATTGCAGGCAGTATTTGGGCCAGGCTATCTACAGCGTTGGCAAAGAAAGCTGGGGATGGAGCTGGAAGGAGAGGTGGGTAGCAGCTCGTCCATGGCAAATCCGGCTTCGTTTTCCTGACCCCATCACAAAGAAAACCACTGACAGCAAAGTTCCATTGTCTAATTCTGAGTTGTCAAATACAAAGGAAACTCCGAAAGGGAAAGAAAACAACATTCCAGATCTGTCTAACAACAATCTAGCCAAATAA 852 0.4249 MKKRKEDKLEQAKVQFTPEKLDESSEEKQDETLEESNSIPNEGLVVLETTVPTRLMEDIAATRIQNAFRAFLARRTLHNIRDTALNYTINIAPSKVELKLEAAKEQAVTTLNYIHTWSRIQEQIKARRLYMLTEARIKQKKLENQLKLAAKIHQIQVGWCGGSDTMEEILFRIHQREEAAVKRERAMAYAFSHQSIFQWRPNCRQYLGQAIYSVGKESWGWSWKERWVAARPWQIRLRFPDPITKKTTDSKVPLSNSELSNTKETPKGKENNIPDLSNNNLAK 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00552 283 PANTHER IQ-DOMAIN 5-RELATED 36 261 - -
Vimu5g00552 283 MobiDBLite consensus disorder prediction 248 262 - -
Vimu5g00552 283 MobiDBLite consensus disorder prediction 245 283 - -
Vimu5g00552 283 Coils Coil 132 152 - -
Vimu5g00552 283 MobiDBLite consensus disorder prediction 1 39 - -
Vimu5g00552 283 ProSiteProfiles IQ motif profile. 57 86 IPR000048 GO:0005515
Vimu5g00552 283 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00552 Vimu-Chr5 5821265 5826802 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g00552 49 236 IQD Protein Family AT3G15050 54.255 5.42e-69 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g00552 - - gmx:100810603 362.844