Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00504 TTGGTTCATGCTTTAGAAATCCAAGAGCATTATGGACGCTTTCCCAGTCTAGGTTTGGGTCCTTGCAAATTTAAAGTCTTTAGAGTCAATGCTCGTTCTCATAGTGAATCATCAACGTCTTCTCATGTTGAAGAATTACAAACTCAGGTATCTTCATTGACATCACAAGCCAATGAAATAAAGGGAGTGATGACACTTTTGTTGCAAAATCATCAGGGTCCATTGCCTTCACAATTTCATATGTTTCAACAATCACCGAGGAGATTAGCATTGAACTGGAGGAAGGAGTTACTGGAGAAGCCGATAGTTTCCTCGATGCTGGGAGGGGAGAAGCCTTCGATAAGGAAGGGTTATGAGGGGTGCCAACTAGTACCAGAGTTTCCGCGATGTTGGGTGAAAGAGTTGGTAGACTTGTTATTACAAAGGCGGAGGCGACAGTTGATGCTTTTTGAAGGAAGAAGGGTTAATTATGGAAGAAGGGATTTAGACGACTTACAAGATGACTTTGGAAATAAGGGTGAGTATGGCCGCGAAGAGGCTGGAATAATTTCTCCCAGTAAACTAAGGATGAAGTTTTCAGGGCCTCACCATAGTTCTGCTAAGCTTGGCCAAAAGCAACCTGTGTATAGGAAATCCGTTGACACATTCAGCCAGAGAACTTCTCAGTCTAGAGGTGTGACA 681 0.4302 MVHALEIQEHYGRFPSLGLGPCKFKVFRVNARSHSESSTSSHVEELQTQVSSLTSQANEIKGVMTLLLQNHQGPLPSQFHMFQQSPRRLALNWRKELLEKPIVSSMLGGEKPSIRKGYEGCQLVPEFPRCWVKELVDLLLQRRRRQLMLFEGRRVNYGRRDLDDLQDDFGNKGEYGREEAGIISPSKLRMKFSGPHHSSAKLGQKQPVYRKSVDTFSQRTSQSRGVT 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00504 227 MobiDBLite consensus disorder prediction 210 227 - -
Vimu5g00504 227 Coils Coil 43 63 - -
Vimu5g00504 227 MobiDBLite consensus disorder prediction 192 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00504 Vimu-Chr5 5209129 5211065 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g00504 202 227 AP2-EREBP Transcription Factor Family AT4G37750 76.923 9.64e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g00504 K09285 - var:108332710 99.7525