Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00501 ATGATGGCAAAATTGATGCGCAGTCAAACCAAAAAGAATGTTATGTCTGAAAACCTTGCTAATGCAATCCATGAATTTGTGAATCAGATGAGATTGCATGGGAAAGATCTGCATGAAGATGGACAATTCCTTAGCTCACGTGAAGTAATGGAAGCACTTCAGGTCATAAGTTCAGATAAGCAATTGTTCCTTAAACTTCTACAAGAGCCAAATTCGCACTTGCTAAAATACATTCAGGAGTTTGAAAATGCTCAAGGGAGAGATGACAAAGAATGCAGTTCACTTACTACTTCCAACTGCTCTGAACTAGAACTTGTTAGTCTAAAACAAACTAGGGAGAATACCAACCGTAAGCATCTTAACTTTTTCAGGAAAATAAACTCATCTTAA 390 0.3692 MMAKLMRSQTKKNVMSENLANAIHEFVNQMRLHGKDLHEDGQFLSSREVMEALQVISSDKQLFLKLLQEPNSHLLKYIQEFENAQGRDDKECSSLTTSNCSELELVSLKQTRENTNRKHLNFFRKINSS 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00501 129 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 6 127 - -
Vimu5g00501 129 Pfam Protein of unknown function (DUF3741) 28 72 IPR022212 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00501 Vimu-Chr5 5165006 5167563 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g00501 17 70 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 38.889 2.42e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g00501 - - gmx:100782204 190.274