Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu5g00425 | ATGACTTGCTTCCCATTCTCATTTGGTAGGAAAGTGCCCTCTGTGGCAAGACACAATCCAGATATTGATGAAGGCATTCAAAATGTAAGAATCTTTACCTACAAAGAACTAAGAGTTGCATCTGACAATTTCAGTCAGGCCAATAAAATTGGGCAGGGTGGCTTTGGTTCTGTTTATAAGGGATTACTAAAAGATGGAAAACTAGCTGCTATAAAAGTTCTTTCAGCAGAATCAACTCAAGGGGTGAAAGAATTTATGACAGAGATTAATGTGATCTCAGAAATAGAGCATGAAAATTTGGTTAAGCTATATGGATGTTGTGTGGAAGGGAACAACCGAATACTAGTCTACAATTATCTTGAGAACAATAGCCTTTCACAAACCCTTTTAGGTTCAGGTCACAGTAGTAACATCTTTTTTGATTGGAAAACACGATCTAGGATTTGCATTGGGATTGCACGTGGGCTCTCCTATCTGCATGAAGAAGTAAGACCACATATTGTTCATAGGGATATAAAAGCAAGCAATATCCTCCTTGACAAAAACCTTACACCTAAGATTTCAGATTTTGGTCTTGCAAAGCTTATTCCATCATACATGACTCATGTCAGCACGCGTGTGGCCGGAACAATAGGTTATTTGGCACCAGAGTATGCATTAAGGGGGCACCTCACACGTAAAGCAGATATTTACAGCTTTGGTGTACTCCTTGTGGAGATAGTGAGTGGAAGATGTCACACTAATACACTGTTACCGATAGGAGAGCAGTTTATTTTAGAAACGACATGGGAGCTTTATCAGCGAAGGGAATTGGTAGCGCTTGTAGATGCATCCCTAGACGGGCATTTTGACGCCGAGGAGGCCTGTACATTTCTGAAAGACACGTCGAAACTCCGGCCACCAATGTCTTCTGTGGTGAAGATGCTCACTGGAGAAATGGACATAGATGAAAGCAAGATAACAAAGCCAGGCCTGATTTCAGATTTTATGGATCTTAAAATCAGAGGAGATAAAAAAGATGGTGATATTGAAACCAAGGGTTCATCTTCCTACAATGCATCTTCTGCTTCAGATAGCCAGGGTAACACCATGTCATTTGCTGCAAGTACAAGTACAACCACAACCTTCACTCTTGCTATGGCTCTCTCTATCAGACCGTCTCCGAGAGTGCAGCCTGAACGAAGAGATTACATCAGCTACTTCGATTCTCTCCTCTGCTCACGTGACAAATACGACTCCAGTGACGAGGTGATACCGGACTACGAGGTAATCGATGTGGTGGCGGATGGTGGCTACGGGCGAGTCTACCGGTGCCTCGAGCCTGTCACCTACAATGTCGTCGCCTTGAAACAGATCATAATAATCGGCTCGTTCCAGGGTGTACCGGCTCAGATCATCCGCGAAGTGGCGTTCCTCAAAGAACTCCGCCATAATAACATTGTGAAGTTGCTTAAAGTCTATGTCAGGGGAGACAGATATGTCAATCTTGTCTTCGAGCATCTCCAGTGCGACCTTCATGACTATATTAGGAAAAGCCGTTATCGCAGTTACAAGATTATAAAGATACTCCTTGCTCTGGATTTCTGCCATACGCGTAAGGTTCTACATAGAGATTTGAAACCCAGCAATGTGCTGGTTGATGAACCTAATTTGCTGATCAAACTTGCGGATTTTGGTTTGGCTAGAGAGTTTAGAGATGACATATTATATACTGAGCAGTTAGGAACTGCCTGGTACAGGGCACCTGAAATGTTGTTCGACAACTATCGATATTCATCTCCAATTGATTTGTGGGGTGCTGGCTGTGTATTTGCTGAGATGCTAATTGGAGGACCTCTATTCCATACTAGTAGGAACCGGAATGAGTTGGAGGCAATTTTCAGACTGTTAGGTACTCCCACAGAGGATACATGGCCAGGAATCACTCAAGTATTGCCTAACATTCATAAGTACCCGAAATATCAGCCAGTGGGCATGCACAATCTGTTTCCTAAACTGGAACAAAGTGGCCAGAATCTTCTAGCAAGAATGCTTTCCATGAACCCAAATGACAGGATTTCTGCGTCAGCCGCTCTAAACCATGCTTACTTTAGGGATGCTCGGCCGCCAAGGGAGCAGTCGTCGGGTTGCATTCCTTTTCGATGA | 2145 | 0.4354 | MTCFPFSFGRKVPSVARHNPDIDEGIQNVRIFTYKELRVASDNFSQANKIGQGGFGSVYKGLLKDGKLAAIKVLSAESTQGVKEFMTEINVISEIEHENLVKLYGCCVEGNNRILVYNYLENNSLSQTLLGSGHSSNIFFDWKTRSRICIGIARGLSYLHEEVRPHIVHRDIKASNILLDKNLTPKISDFGLAKLIPSYMTHVSTRVAGTIGYLAPEYALRGHLTRKADIYSFGVLLVEIVSGRCHTNTLLPIGEQFILETTWELYQRRELVALVDASLDGHFDAEEACTFLKDTSKLRPPMSSVVKMLTGEMDIDESKITKPGLISDFMDLKIRGDKKDGDIETKGSSSYNASSASDSQGNTMSFAASTSTTTTFTLAMALSIRPSPRVQPERRDYISYFDSLLCSRDKYDSSDEVIPDYEVIDVVADGGYGRVYRCLEPVTYNVVALKQIIIIGSFQGVPAQIIREVAFLKELRHNNIVKLLKVYVRGDRYVNLVFEHLQCDLHDYIRKSRYRSYKIIKILLALDFCHTRKVLHRDLKPSNVLVDEPNLLIKLADFGLAREFRDDILYTEQLGTAWYRAPEMLFDNYRYSSPIDLWGAGCVFAEMLIGGPLFHTSRNRNELEAIFRLLGTPTEDTWPGITQVLPNIHKYPKYQPVGMHNLFPKLEQSGQNLLARMLSMNPNDRISASAALNHAYFRDARPPREQSSGCIPFR | 714 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu5g00425 | 714 | MobiDBLite | consensus disorder prediction | 340 | 362 | - | - | |
Vimu5g00425 | 714 | Pfam | Protein kinase domain | 45 | 244 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu5g00425 | 714 | Pfam | Protein kinase domain | 421 | 697 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu5g00425 | 714 | ProSiteProfiles | Protein kinase domain profile. | 44 | 315 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu5g00425 | 714 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 167 | 179 | IPR008271 | GO:0004672|GO:0006468 | |
Vimu5g00425 | 714 | Gene3D | Phosphorylase Kinase; domain 1 | 412 | 513 | - | - | |
Vimu5g00425 | 714 | ProSitePatterns | Protein kinases ATP-binding region signature. | 50 | 72 | IPR017441 | GO:0005524 | |
Vimu5g00425 | 714 | FunFam | Putative LRR receptor-like serine/threonine-protein kinase | 120 | 321 | - | - | |
Vimu5g00425 | 714 | Gene3D | Transferase(Phosphotransferase) domain 1 | 120 | 322 | - | - | |
Vimu5g00425 | 714 | FunFam | cold-responsive protein kinase 1 | 16 | 119 | - | - | |
Vimu5g00425 | 714 | ProSiteProfiles | Protein kinase domain profile. | 421 | 697 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu5g00425 | 714 | SUPERFAMILY | Protein kinase-like (PK-like) | 25 | 309 | IPR011009 | - | |
Vimu5g00425 | 714 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 534 | 546 | IPR008271 | GO:0004672|GO:0006468 | |
Vimu5g00425 | 714 | Gene3D | Phosphorylase Kinase; domain 1 | 15 | 119 | - | - | |
Vimu5g00425 | 714 | MobiDBLite | consensus disorder prediction | 346 | 362 | - | - | |
Vimu5g00425 | 714 | SUPERFAMILY | Protein kinase-like (PK-like) | 416 | 702 | IPR011009 | - | |
Vimu5g00425 | 714 | SMART | serkin_6 | 421 | 697 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu5g00425 | 714 | SMART | serkin_6 | 44 | 321 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu5g00425 | 714 | PANTHER | CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 | 428 | 587 | - | - | |
Vimu5g00425 | 714 | Gene3D | Transferase(Phosphotransferase) domain 1 | 514 | 709 | - | - | |
Vimu5g00425 | 714 | FunFam | CMGC family protein kinase | 499 | 702 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu5g00425 | Vimu-Chr5 | 4083695 | 4093103 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu5g00425 | 420 | 610 | Receptor kinase-like Gene Family | AT1G07650 | 31.731 | 5.26e-14 | 73.9 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Vimu5g00425 | Pkinase | 9.7e-59 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu5g00425 | - | - | gmx:100800503 | 635.565 |