Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00328 ATGGAGAAGATAAACATGAAGCAAGTGAGATGCATAGCAAAGATAGTGGGAACATTAGTGACAGTTGCAGGGGCTATGCTAATGACCTTATACAGAGGTCCTATAGTGGAGATGGTGTGGGCCAAACATCCCCACAATAAAACCAATGGAACAACAAGCACAGGATCATTGGACAAAGATTGGTTCTTAGGATGCATCTTTCTTATCATTGCCACCCTTGCATGGGCTTCCCTATTTGTTTTACAAGCAAAAGCTATACAAACCTACAAGAATCATCAACTCAGTCTCACTTCACTTGTGTGCTTTATTGGCACTGTTCAAGCTATTGCTGTTACTTTTGTTGCTGAACACAACCCTTCTGTTTGGAGAATTGGGTGGGATATGAACTTACTTGCTGCTGCATATGCTGGGATTGTGACATCAAGCATATCATACTATGTACAAGGACTTGTGATTAAGAAGAAAGGACCTGTCTTTGCAACTGCTTTTAGCCCTTTGATGATGATCATTGTTGCCATCATGGGTTCCTTTATCCTTGCAGAACAAATTTATCTTGGAGGTGTGATTGGTGCCATCTTGATTGTTATAGGTTTATACTCAGTTCTATGGGGAAAGCACAAAGAACAAGTAGAGAGTAAAGTGGGAGATGAAATTCCATTGGCTGTAAAAGATGGTCAAAGTTGTGTAATTTCAGGGCTAAATGTAAAAAATGATTTTACTGAAGAAAAATATGGTGAGAAAGAAGATTGCAAGAATAAGAAGCCCTCCTCAGTTGAAGTAACAGAAGCTTCTTCAAGTGTCTCTGTAGAAAGCTATTTACTGAGAAGTTCTGAAAGAGGAAAATGGCGACAGAAAAGCATGGAGGTTGTTCAAAGTTCTTTGAATGCTCAAAACCCTACTTGGCGATGA 909 0.396 MEKINMKQVRCIAKIVGTLVTVAGAMLMTLYRGPIVEMVWAKHPHNKTNGTTSTGSLDKDWFLGCIFLIIATLAWASLFVLQAKAIQTYKNHQLSLTSLVCFIGTVQAIAVTFVAEHNPSVWRIGWDMNLLAAAYAGIVTSSISYYVQGLVIKKKGPVFATAFSPLMMIIVAIMGSFILAEQIYLGGVIGAILIVIGLYSVLWGKHKEQVESKVGDEIPLAVKDGQSCVISGLNVKNDFTEEKYGEKEDCKNKKPSSVEVTEASSSVSVESYLLRSSERGKWRQKSMEVVQSSLNAQNPTWR 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00328 302 PANTHER WAT1-RELATED PROTEIN 1 212 IPR030184 GO:0016020|GO:0022857
Vimu5g00328 302 Pfam EamA-like transporter family 63 202 IPR000620 GO:0016020
Vimu5g00328 302 SUPERFAMILY Multidrug resistance efflux transporter EmrE 119 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00328 Vimu-Chr5 3030773 3035690 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g00328 1 209 Nodulin-like Gene Family AT5G07050 69.626 3.70e-103 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g00328 - - gmx:100804390 441.039