Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00327 ATGGCCGCCGAAAAGCTTGGAGGTTGTGCCATGTTCTTTGCAAGCTCAAAACCCTACTTGGCTATGATCTCTTTGCAGTTTGGCTATGCTGGCATGAACATTATCACAAAGGTTTCTCTCAACCAAGGCATGAGCCACTATGTTCTTGTGGTTTATCGTCACGCTTTCGCAACTGCCGTTATAGCTCCTTTTGCATTTATCTTTGAAAGGAAAGGTCAACCGAAGATAACATTCTCAATTTTCATGCAACTTTTTATCCTAGGTCTTCTTGGGTTAGTGTCCAAATTCAATAGCAAGTTTTATATTATTATTATTATTAGCAGGCCAGTGATTGATCAAAATTTCTACTATGCCGGGTTGAAGCTCACATCCCCAACCTTTTCATGTGCAATGAGCAATATGCTTCCAGCTATGACTTTTGTTATGGCTGTGTTTTGCAGGTAA 444 0.4032 MAAEKLGGCAMFFASSKPYLAMISLQFGYAGMNIITKVSLNQGMSHYVLVVYRHAFATAVIAPFAFIFERKGQPKITFSIFMQLFILGLLGLVSKFNSKFYIIIIISRPVIDQNFYYAGLKLTSPTFSCAMSNMLPAMTFVMAVFCR 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00327 147 PANTHER WAT1-RELATED PROTEIN 17 144 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00327 Vimu-Chr5 3029692 3030622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g00327 1 147 Nodulin-like Gene Family AT5G07050 73.469 3.56e-71 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g00327 - - gmx:100804390 238.424