Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00297 ATGGCTTCAAAAGGAGGGCTGCAAGCCTATGAAGACGAGAAGCTCCTTCTGTCCCTTCCCAAAGAGAAGGGTACTACTTGGTTGAAAGCCCTTACTTTTTCTATTCTCAACAGAAAACGTTTCTCATCTTCTGATAATCATCCATTACTCACTTCCAATTCTCATGAACTTGTTCCTTTCCTTGACTTCATCTTTCATGGTGATAACATCCAACACAAGCTTTCTTACCTCTCCAATATGACTGAACCAAGACTTTTTGGCACTCACATTCCATTCCCTTCCCTCTCCAACTCAATCAAAGAATCCAACTGTAAGATAGTTTATATCTGCAGAAATCCATTTGACACTTTTGTTTCATATTGGATCTTCGCCAATAAAATTAATCCAGACTCTCTGCATAAACTGACAATGGAAGAAGCCCTAGAAAACTAG 432 0.3935 MASKGGLQAYEDEKLLLSLPKEKGTTWLKALTFSILNRKRFSSSDNHPLLTSNSHELVPFLDFIFHGDNIQHKLSYLSNMTEPRLFGTHIPFPSLSNSIKESNCKIVYICRNPFDTFVSYWIFANKINPDSLHKLTMEEALEN 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00297 143 Gene3D - 1 143 IPR027417 -
Vimu5g00297 143 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 143 IPR027417 -
Vimu5g00297 143 PANTHER SULFOTRANSFERASE SULT 8 142 - -
Vimu5g00297 143 Pfam Sulfotransferase domain 15 139 IPR000863 GO:0008146
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00297 Vimu-Chr5 2774492 2775058 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g00297 K22312 - gmx:100789023 173.326