Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00237 ATGGCTTATGCTAGGCTTGCTACTTTGGCTCTCTTCTTGCTTGCCACTTCCACAATGTTTCCGATGAAGAAGATAGAAGCAGTAGTCTGTTCAGGTGCTTGTTCACCGTTTGAGATGCCACCGTGCGGGTCAACTGATTGTCGCTGTATCCCTATTGTACTATTTGGTGGTTTCTGCATTAATCCAACTGGACTTTCATCTGTGGCGAAGATGATAGACGAACATCCGAACCTATGTCAATCTGATGATGAATGCATGAAGAAAGGAAGTGGCAATTTCTGTGCTCGTTATCCAAATAACAACATGGATTATGGTTGGTGCTTTGACTCTGATTCTGAAGCTCTTAAGGGTTTCTTGGCCATGCCTGCAGCAATCAAGTAA 381 0.4383 MAYARLATLALFLLATSTMFPMKKIEAVVCSGACSPFEMPPCGSTDCRCIPIVLFGGFCINPTGLSSVAKMIDEHPNLCQSDDECMKKGSGNFCARYPNNNMDYGWCFDSDSEALKGFLAMPAAIK 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00237 126 SUPERFAMILY omega toxin-like 30 64 - -
Vimu5g00237 126 Pfam Albumin I chain b 30 64 IPR012512 GO:0045735
Vimu5g00237 126 Pfam Albumin I chain a 74 121 IPR032000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00237 Vimu-Chr5 2229354 2230259 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g00237 - K23342 gsj:114372913 216.468