Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00233 ATGGCTTATGCTAGGCTTGCTCCTTTGGCTCTCTACTTGCTTGCCACTTCCATAATGTTTCCGATGAAGAAGATAGAAGCAGCAGACTGTTCAGGTGCTTGTTCACCGTTTGAGATGCCACCGTGCCGGTCACGTGATTGTCGCTGCATCCCTATTGGACTATTTGTTGGTTTCTGCATTAATCCAACTGGACTTTCATCTGTGGCGAAGATGATAGACGAACATCCGAACTTATGTCAATCTGATGATGAATGCATGAAGAAAGGAAGTGGCAACTTCTGTGCTCGTTATCCCAATAACTACATCGATTATGGTTGGTGCTTTGACTCTGATTCTGAAGCTCTTAAAGGCTTCTTGGCCATGCCTGCAGCAATCACCAAGTAA 384 0.4505 MAYARLAPLALYLLATSIMFPMKKIEAADCSGACSPFEMPPCRSRDCRCIPIGLFVGFCINPTGLSSVAKMIDEHPNLCQSDDECMKKGSGNFCARYPNNYIDYGWCFDSDSEALKGFLAMPAAITK 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00233 127 SUPERFAMILY omega toxin-like 29 64 - -
Vimu5g00233 127 Pfam Albumin I chain b 30 64 IPR012512 GO:0045735
Vimu5g00233 127 Pfam Albumin I chain a 74 121 IPR032000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00233 Vimu-Chr5 2186953 2187453 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g00233 - K23342 gmx:100815970 244.202